Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02615 ATGGCAAAATCGCCAGAAGATGTTTATCCTCATAAGGCTTTCGGTTGGGCTGCGAGAGATACAACCGGGATCCTTTCACCTTTTCGTTTCTCTAGAAGGGAAAATGGACCCGATGATGTCACCTTAAAAATCCTTTACTGTGGGGTTTGCCACTCCGATTTGCATAGTATGAAGAATGATTGGGGTGGTACAAATTACCCTATTGTTCCTGGGCACGAAATTGTTGGAGTTGTGACAAAAACTGGAAACAATGTGACTAAATTCAAGGAGGGGGACAATGTTGGGGTTGGGGTCATTGTGGATTCGTGTAGGAAATGTGAAGGATGCACTCAAGAACTGGAGAATTACTGCCCACAAGCCAAATTTACCTACAACTCTCATTACTACGATGGAACGATAACCTATGGTGGTTATTCTGATATCGTAGTCGTTCACCAGCACTTTGTTCTGCGTTTTCCTGAGAACTTACCCCTTGATGCGGGTGCTCCTCTCCTCTGTGCTGGGATTACAGTGTACAGTCCAATGAAATATTATGGGATGACAGAACCAGGAAAACATCTGGGAGTGGTTGGACTAGGGGGTCTTGGTCATGTTGCTGTGAAACTTGGCAAGGCCTTTGGTTTGAAAGTTACTGTCATCAGCACCTCCCCGGAGAAGAAAGCCGAGGCTGTTGAAAAACTAGGGGCTGATTCTTTTCTTGTTTCTAAAGACCCTTCACAAATTAAGGCAGCTATGGGAACTATGGACTTCATCGTTGATACAGTTTCTGCAATTCATCCCCTAGCACCACTGTTAGGTCTATTGAAAATGAATGGGAAATTGGTCACAGTTGGTTTGCCAGACAAGCCCCTTGAGCTCCCGGTGTTTCCTTTGGTCTTGGGACGTAAGCTTGTTGGAGGAAGTAATATCGGAGGAATGAAAGAAACGCAGGAGATGTTAGACTTTTGTGCAAAGCACAATATACGTGCAGACATTGAGTTGATCCGCATGGACTACATCAACACAGCCATGGAAAGGCTTGCAAAATCTGATGTGAAATACCGGTTTGTGATTGATGTGGCAAACTCCTTTTCCCAGTAA 1080 0.4463 MAKSPEDVYPHKAFGWAARDTTGILSPFRFSRRENGPDDVTLKILYCGVCHSDLHSMKNDWGGTNYPIVPGHEIVGVVTKTGNNVTKFKEGDNVGVGVIVDSCRKCEGCTQELENYCPQAKFTYNSHYYDGTITYGGYSDIVVVHQHFVLRFPENLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVVGLGGLGHVAVKLGKAFGLKVTVISTSPEKKAEAVEKLGADSFLVSKDPSQIKAAMGTMDFIVDTVSAIHPLAPLLGLLKMNGKLVTVGLPDKPLELPVFPLVLGRKLVGGSNIGGMKETQEMLDFCAKHNIRADIELIRMDYINTAMERLAKSDVKYRFVIDVANSFSQ* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02615 359 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Pte2g02615 359 FunFam probable cinnamyl alcohol dehydrogenase 16 175 - -
Pte2g02615 359 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Pte2g02615 359 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Pte2g02615 359 CDD CAD1 14 352 IPR047109 GO:0016616
Pte2g02615 359 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Pte2g02615 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Pte2g02615 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Pte2g02615 359 SUPERFAMILY GroES-like 21 185 IPR011032 -
Pte2g02615 359 PANTHER ALDEHYDE REDUCTASE 9 356 IPR047109 GO:0016616
Pte2g02615 359 Gene3D - 167 323 - -
Pte2g02615 359 Gene3D - 16 353 - -
Pte2g02615 359 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02615 Pte-Chr2 45182768 45186226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02615 8 357 Monolignol Biosynthesis Gene Families AT2G21730 71.591 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02615 K00083 - jre:108994266 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02615 2 45182768 45186226 Pte2g02615 2 45182768 45186226 RCT