Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02614 ATGGAAAAATTGGATTTGGATGACTTCCGGTCGATATTGGAGTCGGCCGGAGTGGATGTGTGGCTGTTCATTGATACTGCAATCACTGTGGCGTCGTTGGATTACGGCGAGGAATTGAAGCGCCGGAGAGATGGGATCGTCGAGCGGGTTTATGCAGCAACCTTGGATTGTAACAGGTGCCAAAACTGCGATGCTAATTGTCGTTTACCAAATGGCCGTGTATCCAAATCTCCGGCCCTGAAACAGACAGCCCAGGGGTCCTCACGGAAAAGAGCTGTTTCGCCTCCCACTCCTGAATCCACTGGTAGAGATGACGAGGACGAAGACTTAGATCCATACAGTGGTTTGTTTGACGATGAACGAAAGAAAATTCTAGAGATTAAAGAACAGCTCGAACATCCTCAGCAGTCTGAAGATTCTCTTGTTGAATTGCTACAAAGTCTTGCAGACATGGATATCACCTTCCAGGAGCTCAAGGAAATGGATATAGGAAGGCATGTGAATCAGTTTCGGAAGCATCCATCCAGTGATGTTCGAAGATTGGTCAAGTCACTCGTCAGGAAATGGAAGGATAAAGTTGATGAATGGGTGAAGAAGCAGCCTGGAGAGGAAGGATCTTCTGGTCTTATGGCAGATGATGGAGATTCACCCCAACAGAGAAATGTCCAGAGTGGCAATCACCAGGTTTCTGATTTTGCAAATTCTCCAAATCGACGTAGTGCTGGAAGTTCTGGCTCTGATAGGAACCATTCAGAACCGGAACCCAAGCCAAAAGCGATACCTAGAAAAGAAACACCTATAAAACCGACCCTATCAAATGCTGTTTCTCCTTTTCCTCCTCAATATGGACAGAGAGAAGAAAGAGACATGAATTATGAGCAAGAGAAACTTGCATCAGCAAGAAAACGGCTTCAAGACAGTTACAAAGAAGCAGAAAATGCCAAGAAGCAAAGAACGATACAGGTGATGGATATCCATGAGATACCTAAACCAAAGAATGCCTTCTTTGCCAAGAACAAGGTCGGTGGTGTTGGTGGGTCTCACGGAAGGCACTGGTGA 1059 0.4589 MEKLDLDDFRSILESAGVDVWLFIDTAITVASLDYGEELKRRRDGIVERVYAATLDCNRCQNCDANCRLPNGRVSKSPALKQTAQGSSRKRAVSPPTPESTGRDDEDEDLDPYSGLFDDERKKILEIKEQLEHPQQSEDSLVELLQSLADMDITFQELKEMDIGRHVNQFRKHPSSDVRRLVKSLVRKWKDKVDEWVKKQPGEEGSSGLMADDGDSPQQRNVQSGNHQVSDFANSPNRRSAGSSGSDRNHSEPEPKPKAIPRKETPIKPTLSNAVSPFPPQYGQREERDMNYEQEKLASARKRLQDSYKEAENAKKQRTIQVMDIHEIPKPKNAFFAKNKVGGVGGSHGRHW* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02614 352 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 5 352 IPR044790 -
Pte2g02614 352 MobiDBLite consensus disorder prediction 74 113 - -
Pte2g02614 352 MobiDBLite consensus disorder prediction 197 304 - -
Pte2g02614 352 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 122 207 IPR035441 -
Pte2g02614 352 MobiDBLite consensus disorder prediction 249 263 - -
Pte2g02614 352 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 118 207 IPR035441 -
Pte2g02614 352 ProSiteProfiles TFIIS N-terminal domain profile. 119 196 IPR017923 -
Pte2g02614 352 Coils Coil 294 321 - -
Pte2g02614 352 Pfam TFIIS helical bundle-like domain 144 193 IPR017923 -
Pte2g02614 352 MobiDBLite consensus disorder prediction 212 248 - -
Pte2g02614 352 CDD TFIIS_I 122 194 - -
Pte2g02614 352 MobiDBLite consensus disorder prediction 286 304 - -
Pte2g02614 352 SMART TFS2_5 124 195 IPR003617 GO:0005634
Pte2g02614 352 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02614 Pte-Chr2 45179850 45181899 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pte2g02614 Med26 1.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02614 - - jre:108994265 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02614 2 45179850 45181899 Pte2g02614 2 45179850 45181899 RCT
Pte2g02614 2 45179850 45181899 Pte3g00050 3 671890 675208 RCT