Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02607 ATGAGCTTGGCGGCAACGGAGGCATCGTCAGAAGATGATGCAGGTCCCGCCGAACCACCTGATCCTGATATACTTGAAATTGATCCAACTTCTCGATATATCCGGTATAAGGAAGTGCTCGGGAAAGGTGCATTCAAAACAGTATACAGGGCATTTGATGAGGTCAATGGGATTGAGGTGGCTTGGAATCAAGTCCGCATAGATGATGTACTGCAATCCCCTGGCGATCTAGAGAGGCTGTATTCTGAAGTTCATCTCTTGAAATCCTTGAGGCACAACAATATTGTAAAATTTTATAATTCCTGGATCGATGATAAGAACAAGACTGTGAATATAATTACTGAGCTATTCACCTCAGGCAGCCTCAGACAGTACCGTAAGAAGCACAAGAAAATTGACATGAAGGCTGTTAAGGGATGGGCTAGACAGATATTGGCAGGTTTAAACTACCTTCACACTCATGATCCACCGATCATACACAGGGATCTGAAGTGTGATAACATTTTTATCAATGGGAACCAAGGAGAGGTTAAAATTGGAGATCTTGGTCTCGCAACCATCTTAGAGCAGGCGAATGCCAGGAGTGTGATCGGCACCCCTGAATTCATGGCTCCTGAGCTTTATGATGAAGACTACAATGAATTGGCTGACATCTATTCCTTCGGAATGTGCATGCTTGAGATTGTGACATTTGAATATCCTTATAGTGAATGTAAAAATTCTGCACAGATATACAAGAAGGTTTCATCTGGTATAAAGCCTGCTTCTCTTTATAAGATAAAAGACACGCAGATGAAAAGTTTCATTGAGAAGTGTTTGGTCCCAGCACCTCAAAGATCATCAGCGAAGGAGCTTTTGATGGATCATTTTCTTCAGGGTAATACTAGTGGCCATCCTCTGCCTCTTCCAGACATAGTCCTTCCCAAAATAGGAACCTTTGGGGATCGTTGCCTCATGTCAGAAGGTCCCGCTATTGCATCCAATGTTCCGATTTCAACAGATGTCGGTGATGATGGTGAAATTCCTTCAATCAATATATATAATAATATTGTTGACGGTGGTTCCTGTGCTACATGTGTGGAGGTCCAGAGGACAAATAGGGGAGACTTTTTCTTTTTGAAAGGCGAGGGAAGCGATGAGAACTCTGTGTCGTTGGTACTTCGTATAGCTGATCACAATGGTCGTGCTAGAAATATTCATTTTCTGTTCTACCTGGATAATGATACTGCCATGTCAGTCTCAAGTGAAATGGTTGAGCAACTGGAACTTGCGGATCATAATGTCAAGTCTATAGCAGAGCTGATAGACATTTTATTGGTGAATTTAGTTCCAAGTTGGAAACCATGTGTACGTATTGATCATTTAGTTGTTACAAATACCCTCACGAGACATGAAAACTACTGTAAAGCGACTGACTCTGCCGGAGCCAACAACTGTTCCGGAAAAGCTAAAGAAAGTGTGAATGGTATCATTACCCCATCCCAACAGGCCACCGTTACTTCTTCCTCTCCTGAAGGGCGTTCTCAATCAGTTGAAAGAAAATCCGTTTGTGTAAAATCTGATGAGATGCAATGTGATGCTGACATTGTTCACCAAATTCCAGTGACTAAGGAACATGTTTCGCCCCAGGTGTCACATGCTTCTGCAATGTCTAACGAATATAACGATAAGAAGCTTTCTTTAAGTTCATTCATGTCTGTAGAGTCAGGATCTCTGGACTTCAACTCACATGGACCGAACAAGGGAACGACATTATCATTGGGATTAGTATCAGGTACATTGCATGATGGAAATGACTATCTTGACATGGGTGGATCTGAAAATGTGGATCTTTCATGTCAGTCTATAGGTGGTTGCTCGTCTTCAAATGTGGAAGCTGAGTTAAAAACTGAGCTGGAAATGATTGAACTGTATTACCAAGAGGCATTAAAAGAAATATCCAGGAGAAGAGATGAGGCTATTGAGGATGCTAGAAAAAGGCTATCACAGAAAAAGCAAGGAAGTTAG 2007 0.4185 MSLAATEASSEDDAGPAEPPDPDILEIDPTSRYIRYKEVLGKGAFKTVYRAFDEVNGIEVAWNQVRIDDVLQSPGDLERLYSEVHLLKSLRHNNIVKFYNSWIDDKNKTVNIITELFTSGSLRQYRKKHKKIDMKAVKGWARQILAGLNYLHTHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATILEQANARSVIGTPEFMAPELYDEDYNELADIYSFGMCMLEIVTFEYPYSECKNSAQIYKKVSSGIKPASLYKIKDTQMKSFIEKCLVPAPQRSSAKELLMDHFLQGNTSGHPLPLPDIVLPKIGTFGDRCLMSEGPAIASNVPISTDVGDDGEIPSINIYNNIVDGGSCATCVEVQRTNRGDFFFLKGEGSDENSVSLVLRIADHNGRARNIHFLFYLDNDTAMSVSSEMVEQLELADHNVKSIAELIDILLVNLVPSWKPCVRIDHLVVTNTLTRHENYCKATDSAGANNCSGKAKESVNGIITPSQQATVTSSSPEGRSQSVERKSVCVKSDEMQCDADIVHQIPVTKEHVSPQVSHASAMSNEYNDKKLSLSSFMSVESGSLDFNSHGPNKGTTLSLGLVSGTLHDGNDYLDMGGSENVDLSCQSIGGCSSSNVEAELKTELEMIELYYQEALKEISRRRDEAIEDARKRLSQKKQGS* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02607 668 Gene3D Transferase(Phosphotransferase) domain 1 117 297 - -
Pte2g02607 668 FunFam probable serine/threonine-protein kinase WNK9 117 296 - -
Pte2g02607 668 MobiDBLite consensus disorder prediction 492 513 - -
Pte2g02607 668 SMART serkin_6 34 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02607 668 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 383 436 IPR024678 GO:0004674|GO:0005524
Pte2g02607 668 Pfam Protein kinase domain 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02607 668 MobiDBLite consensus disorder prediction 492 510 - -
Pte2g02607 668 FunFam Probable serine/threonine-protein kinase WNK1 19 115 - -
Pte2g02607 668 MobiDBLite consensus disorder prediction 1 26 - -
Pte2g02607 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Pte2g02607 668 Gene3D - 381 456 - -
Pte2g02607 668 CDD STKc_WNK 32 291 - -
Pte2g02607 668 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 20 661 - -
Pte2g02607 668 Gene3D Phosphorylase Kinase; domain 1 20 115 - -
Pte2g02607 668 ProSiteProfiles Protein kinase domain profile. 34 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02607 668 SUPERFAMILY Protein kinase-like (PK-like) 27 295 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02607 Pte-Chr2 45114002 45118089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02607 134 487 MAP Kinase Kinase Kinase AT1G49160 66.011 1.57e-167 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pte2g02607 Pkinase 4.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02607 K08867 - vvi:100259251 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02607 2 45114002 45118089 Pte2g02607 2 45114002 45118089 RCT