Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02588 ATGTCCAACCGGTGGAAGAGAAAAGTCCACGATGATCAAGCGTCTGACGGCGAGCATGAAGGCCACGCGCCTGTCAACAAGTCTGCTAGGAAAGATTCAGACGATTCTGATAGCATCGTCGTCTGTGAGTTAGGAAAAAATAAGAGAATTACCGTGAGGAACTGGAATGGGAGGACTTGGATCGATATACGTGAGTATTACGCGAAAGACGGGAAAGAATTGCCCGGAAAGAAAGGTATCTCACTATCGATGGACCAGGTATACTCTGTTCTTTTATTTACAAGGGATGTCTGTGGTATTTTGTGCTATTGTATGTGTCATTTATCTTCTTGTCTCTTCTTGGCTTCATTTCTTGCTGCTTTTATGCAGTGGAAAATTCTTCGGGATCATGCAGAAGAAATCAACGAGGTAGTTAGTCGGAACTGTTAG 429 0.4359 MSNRWKRKVHDDQASDGEHEGHAPVNKSARKDSDDSDSIVVCELGKNKRITVRNWNGRTWIDIREYYAKDGKELPGKKGISLSMDQVYSVLLFTRDVCGILCYCMCHLSSCLFLASFLAAFMQWKILRDHAEEINEVVSRNC* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02588 142 Pfam Transcriptional Coactivator p15 (PC4) 42 87 IPR003173 GO:0003677|GO:0006355
Pte2g02588 142 Gene3D Transcriptional Coactivator Pc4; Chain A 31 97 IPR009044 GO:0003677|GO:0006355
Pte2g02588 142 MobiDBLite consensus disorder prediction 1 36 - -
Pte2g02588 142 SUPERFAMILY ssDNA-binding transcriptional regulator domain 41 92 IPR009044 GO:0003677|GO:0006355
Pte2g02588 142 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 15 140 IPR045125 GO:0003713|GO:0060261
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02588 Pte-Chr2 44871843 44876955 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Pte2g02588 PC4 2.8e-23 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02588 K25815 - nnu:104606666 125.946