Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02576 ATGTTAGAGTCCCATAGATCAAATATGGCATGCGGTGCTAGTAGTTTTAACCTTCCTCCTGGATTGAGCTTCCGCCCTACGGATGCAGAAATTGTTGTTCACTTTCTGTATCCTAAAGTAATGCTTTTACCATGTCATCCCAATTTCATTCCTGATATTGACCTGAGTCTACACAATCCATGGGAACTGCATGGCCAAACATTTGCAGGTAATACAAACTATTATTACTTCTTCAGCCTTAAAGATTGTAGAATTGGAAAAAGTGGGTATTGGAAGGAATTAGACATCATCCATCCTATATTTTCGTCTGACGACAAGAAAGTAGGTTTCAAGAAATATCTAGTCTTCAACATGATGGGTCAAAATTCAGAAAGTGCAGCGGAGACTACCTGGATAATGCAAGAGTATCACCTTTGCCCCTCTGAGTTGAACCTGGATAGCAGTACTGCTGTGTACAACACCAATCAAGGGAAACGAAAGCTTAATTATGGAAATAAGATTGAGTGGGTTCTATGTCGGGTATATGAAAGAGATGAAGATTCTGGACCAGCTGAATTCTGCTGTATGGATGAAGATGATGGTGGAAGTGAACTCTCTTTACTGGATGAGCTTTTTCTGCAGTCATTAGACGTAGATGATGATCTCAACCAAGTAATTCATTGTTCATTTTGA 672 0.3958 MLESHRSNMACGASSFNLPPGLSFRPTDAEIVVHFLYPKVMLLPCHPNFIPDIDLSLHNPWELHGQTFAGNTNYYYFFSLKDCRIGKSGYWKELDIIHPIFSSDDKKVGFKKYLVFNMMGQNSESAAETTWIMQEYHLCPSELNLDSSTAVYNTNQGKRKLNYGNKIEWVLCRVYERDEDSGPAEFCCMDEDDGGSELSLLDELFLQSLDVDDDLNQVIHCSF* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02576 223 PANTHER NAC TRANSCRIPTION FACTOR 56 18 183 - -
Pte2g02576 223 SUPERFAMILY NAC domain 5 176 IPR036093 GO:0003677|GO:0006355
Pte2g02576 223 ProSiteProfiles NAC domain profile. 18 177 IPR003441 GO:0003677|GO:0006355
Pte2g02576 223 Gene3D NAC domain 27 181 IPR036093 GO:0003677|GO:0006355
Pte2g02576 223 Pfam No apical meristem (NAM) protein 19 138 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02576 Pte-Chr2 44798137 44799379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02576 10 192 NAC Transcription Factor Family AT1G61110 36.269 1.02e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte2g02576 NAM 2.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02576 - - qsa:O6P43_030321 197.208