Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02566 ATGACAACGGAGTTGGAGTTGCCACCTGGGTTCAGATTTCACCCAACAGACGAGGAGTTGGTCAGCCATTACTTGTGCAGGAAGTGTGCTTCACAACCTTTGGCGGTTTCCATTATCAAAGAAGTTGATTTGTATAAGTTCGACCCATGGCAGTTACCAGAGTTAGCTCTGTATGGTGAGAAGGAATGGTATTTCTTTTCTCCGAGGGATAGAAAATATCCGAACGGTTCAAGACCGAACCGGGCAGCTGGAACCGGATACTGGAAGGCAACTGGAGCAGACAAACCAATTGGCAAACCTAAGCCACTTGGAATAAAAAAAGCACTTGTTTTCTATGCTGGCAAAGCCCCAAGAGGTGTGAAAACTAACTGGATCATGCATGAGTATCGTCTTGCAAATGTTGATAGGTCTGCTGGCAATAAAAACAATTTGAGGCTTGATGATTGGGTGTTATGTCGAATATACAACAAGAAAGGAACACTGGAGAGATACGACACCACAGATGAGAAGATGGCGAATTTACCAGAAATTTATGAGACAAAACCAGATATCAAGATGTACAGTCAAAACATGGCTACCCCACCGGCATTCAAAAAACAGCTAATGTTCACGAATGACATCTTCTACATGGACATGTCCGATATACCGAAGTTACACACAGATTCGAGCAGCTCGGAACACGTGCTTTCACCCGAGGTCACGTGCGAGAAGGAGGTCCAGAGTCAACCAAAGTGGAATGAGCTGGATGACGCTTTTAATTTGCAGTTCAATTACATGGAACATGAATTTTCTGATGACCCTTTTGCCCACCAGTTCCAATCCCAAATATCAATGGACCAGCTCGCTCCGGATATTTTTATGTTTCGAAATAAGCCATTTTGA 882 0.4376 MTTELELPPGFRFHPTDEELVSHYLCRKCASQPLAVSIIKEVDLYKFDPWQLPELALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKPLGIKKALVFYAGKAPRGVKTNWIMHEYRLANVDRSAGNKNNLRLDDWVLCRIYNKKGTLERYDTTDEKMANLPEIYETKPDIKMYSQNMATPPAFKKQLMFTNDIFYMDMSDIPKLHTDSSSSEHVLSPEVTCEKEVQSQPKWNELDDAFNLQFNYMEHEFSDDPFAHQFQSQISMDQLAPDIFMFRNKPF* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02566 293 FunFam NAC transcription factor 16 161 - -
Pte2g02566 293 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Pte2g02566 293 PANTHER NAC TRANSCRIPTION FACTOR 56 7 214 - -
Pte2g02566 293 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Pte2g02566 293 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Pte2g02566 293 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02566 Pte-Chr2 44711909 44713900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02566 1 294 NAC Transcription Factor Family AT1G01720 61.111 6.20e-120 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte2g02566 NAM 3.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02566 - - cave:132165609 443.351