Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02563 ATGGGAGACGGCGCTACTACAGGTCCCGGCAATCGAGGTTTCAATCCAAACAGCGGTAACAGTAGCAGCAGCAATAAGCCAGAGTGGCTACAGCAGTACGATCTTATCGGTAAGATTGGTGAAGGCACCTATGGTCTTGTTTTCCTTGCGAGAATCAAGTCCCAAGCAAATCGCGGAAAATCCATTGCGATCAAGAAGTTCAAGCAGTCAAAGGACGGTGATGGTGTCTCCCCCACTGCTATACGTGAGATAATGTTGCTGCGGGAAATTACACATGAAAATGTAGTGAAGCTGGTTAACGTACATATTAATCACGCGGACATGTCTCTATACCTGGCTTTTGATTATGCCGAACATGATCTCTATGAAATTATAAGGCATCACAGAGACAAGGTCAACCATGGCATCAATCAATATACAGTTAAGTCTTTACTGTGGCAGCTGCTCAATGGTTTGAACTATCTCCATAGTAATTGGATCATTCATCGAGATCTGAAGCCATCAAATATACTGGTTATGGGGGAGGGAGAGGAACATGGTGTTGTTAAAGTTGCTGATTTTGGACTTGCAAGAATATATCAAGCTCCTTTAAAGCCATTATTTGAAAATGGGGTTGTAGTAACAATTTGGTACCGAGCTCCTGAATTGCTTCTTGGGGCAAAACACTATACTAGTGCTGTCGACATGTGGGCTGTTGGATGCATTTTTGCAGAGCTTTTGACCTTGAAGCCTCTATTTCAAGGTCAGGAAGTAAAAGCCCCTCCAAATCCTTTTCAGCTGGATCAACTAGACAAGATATTCAAAGTTTTAGGTCATCCGACGTTAGAGAAGTGGCCATCACTAGCTAATCTTCCCCATTGGCAACAAGATTTACAGCATATTCAAGCACATAAATATGACAATACTGGACTTCATAACGTTGTTCATCTATCCACAAAGAGTCCTGCCTATGATCTGTTGTCTAAGATGCTTGAATATGATCCTCGTAAGCGAATAACTGCTGCACAGGCCTTAGATCATGAGTACTTTCGAATGGAACCGCTACCTGGACGCAATGCACTTGTACCCTGCCAACCAGGAGAGAAAGTTGTCAATTACCCAACCCGTCCAGTGGACACAACAACTGATTTCGAAGGGACAACCAGCCTTCAGCCTTCTCAACCGGTATCAGCTGGAAATGCAGTTTCTGGTAGCTTACAGGGCGCTCATGTGGCAGGCAGATCAGTTCCTCGTCCAATGAATGTTGTTGGAATGCAAAGAATACCTGCTCAAAATATGCAAGCTTATAACATGGCCTCTCAGGCTGGAATGGGAGGTGGAATGAATCCTGGGGGAATCCCTATGCCGCGGGGGGTTTCAGCCCAGGCCCAGCAGCAGCAGGTTTATTGTTTTAGCTGTCATGGCATTCTTGTTGGCCAGTTCGCTCTTATTATAACAAAATGGGTTCTCTGTTTTCTGGTTGCGCGGATTTCAGCAGCTTTTCTCTTTTACAATTCTATTCTTGGCTTTGTTGAACAGTTGAGAAGGAAAGACCAGGGAACGGGATTGAGTGGATACCCACCACAGCAGAAGCCAAGGCGCTTCTAA 1587 0.4474 MGDGATTGPGNRGFNPNSGNSSSSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSQANRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVNHGINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGVVKVADFGLARIYQAPLKPLFENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGQEVKAPPNPFQLDQLDKIFKVLGHPTLEKWPSLANLPHWQQDLQHIQAHKYDNTGLHNVVHLSTKSPAYDLLSKMLEYDPRKRITAAQALDHEYFRMEPLPGRNALVPCQPGEKVVNYPTRPVDTTTDFEGTTSLQPSQPVSAGNAVSGSLQGAHVAGRSVPRPMNVVGMQRIPAQNMQAYNMASQAGMGGGMNPGGIPMPRGVSAQAQQQQVYCFSCHGILVGQFALIITKWVLCFLVARISAAFLFYNSILGFVEQLRRKDQGTGLSGYPPQQKPRRF* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02563 528 Gene3D Transferase(Phosphotransferase) domain 1 116 358 - -
Pte2g02563 528 PANTHER CELL DIVISION PROTEIN KINASE 31 349 - -
Pte2g02563 528 SMART serkin_6 33 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02563 528 SUPERFAMILY Protein kinase-like (PK-like) 28 345 IPR011009 -
Pte2g02563 528 MobiDBLite consensus disorder prediction 1 26 - -
Pte2g02563 528 Pfam Protein kinase domain 33 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02563 528 ProSitePatterns Protein kinases ATP-binding region signature. 39 66 IPR017441 GO:0005524
Pte2g02563 528 MobiDBLite consensus disorder prediction 10 26 - -
Pte2g02563 528 FunFam Cyclin-dependent kinase e-1 21 116 - -
Pte2g02563 528 CDD STKc_CDK8_like 32 343 - -
Pte2g02563 528 ProSiteProfiles Protein kinase domain profile. 33 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02563 528 FunFam Putative cyclin-dependent kinase E-1 117 356 - -
Pte2g02563 528 Gene3D Phosphorylase Kinase; domain 1 19 115 - -
Pte2g02563 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02563 Pte-Chr2 44685464 44692784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02563 26 529 Core Cell Cycle Gene Families AT5G63610 71.260 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Pte2g02563 Pkinase 1.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02563 K02208 - qsa:O6P43_023415 819.305