Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02552 ATGGACACCTTCTCCTTCTTTTTCTTCTGTTTGTATTTCTGCGTGCTCCTGCTGGTTTGTATACGGGTATCGTCGCCTGTGTCCTCAGCTCCAGTGCGATTTCACTCCATTTTCCCCAACTTCACAGCTTCCCATTTCGAATTCATAGATAGTAAAGGTGTTTTCTTGGAGTCCATCAACGGCACTTTCACAGCTTCAATTGCCAATTCTATCCAACAAACCTCGCAGTATTACTTCTCTGTCACTCACACCTTCACAAGCAAGGTTATATGGTCAGCTAATCGTAACTCACCAATATCCAGCTCTGCCCACTTGTACCTCACAAAAACCGGTCTATCAATTGTTGATGAATCCAACCGCAAAATATGGTCAACGCCAGAATTACCCTATAAGGTTTCAGCCATGTGGTTATTGGAAACTGGAAACTTGATTTTGGTTGACGAAAGAAATGAGTCCCTGTGGGAGAGTTTTGACTACCCGACTGATACCTTAGTCATGGGACAAAGGTTGTCTGTTGGGAAATCATTGGATGCTGCTGTTAGTGATTTCAACTTATCTGTTGGAGAACATAGCTTATCGGTTACTGATCACGATGCTATACTTCAGTGGGAAGGTATGAAATACTGGAAGTTGTCTATGGATACTAGAGCTTTCAAGGACACCAACGCGCAGGTGTCATTCATGGTAATGAATCAAACTGGTTTGTATCTTTTTGGGGGTAATGGAACGACAGTAGTGATGCAGGTGGGGTTGGATCCTTCAGCTTTTAAGATTGCAAAGATGGGTTTCGATGGGAAATTTGTAATACTGGCCTTCGGTGGCAACAGGAGTTCCAGCACAACCGAGTTCAGCACTCCCCTTGAAGCTTGCTCCACCCCTTTTGTTTGTGGGAAACTTGGGTTGTGCTCAGCTTCCGGCGTTTGTTCGTGTGTACCAGGTTTTCATAGTGAACCTCGGACCAAAGGTACTTGTGTTCCAAGTAATACAGCTCTGTCATTGCCTTCAGCTTGTAATACAAACAAAATCGACATTGACAAGGTTAGTTCAAGGGTTTCATATAACACTTTGAATCCTGGACTTGATTATTTTGCTACTGATTTCATAGATCCAGTGGGGAATGGCGCAAACTTATCTAGTTGTGCAAATCTATGCACGGATGATTGTTCTTGTTTGGGATTTTTTTTTAGAAATTCCTCCGGTTCTTGTTATCTGCTCAAGAACCAAATAGGTTCGATGATATTGAGATCCAATAGTGGAAATGGTCTTGTTGGGTCAGTGAAAGTTTTGGTCTCACCTGTCCAAACACCACAGACAAAGAAGAGCTTTCCATTGGTTGGTTTCATATTAATACCTTTTTCAGTTTCCATGATACTTGTCGCATTGGCAATCGTTTTCTTGAGAAGGAGAAAGCTGTGTAAAGCTTTGAAGAACAGATTAGGCCGTTCAGACTCGTCTTCTTCATCAGAGCTTGAGCTGATCCCTGGCTTGCCTGTGAGGTTTGACTACGAAGCTATTGCTGCGGCTACTGAAAATTTCCAGACGCAGATTGGTTGCGGTGGCTTTGGTACTGTCTACAAGGGTACCCTGCCAGACAAAACTGTAGTGGCGGTGAAGAGGATTACATCATTTGGGACACAAGGTAAGAAAGGTTTTGGCACTGAGATTGCAGTTATAGCTAACATCCACCATGTCAACCTGGTTAAACTCAAAGGTTTCTGTGCTCAAGGGAGGCATCGGTTCTTGGTATTGGAATACATGGACAGAGGTTCATTGGACCACTTACTTTTTAATGCTGGTCCAGTCTTAGAATGGCATGAGAGGTTTGAGATTGCTCTTGGCACAGCCAGAGGACTCGCATACTTGCACAGCGGATGTGGACATAAGATCATACACTGTGATATTAAACCAGAGAACATTCTCCTTCATGATAAACTTCAAGCGAAAATATCAGATTTTGGCCTTTCAAAGCTTCTAGGCCCTGACCAGTCTTTCCTCTTCACAACACTAAGAGGAACCCGTGGATATCTCGCACCTGAGTGGCTTACTCGCTCTTCAATTACAGACAAGACAGACGTTTACAGTTACGGCATGGTGTTACTAGAAATTGTTAGTGGAAGGAAAAATTCATCCTGGCAAGCAAGGAGCACAAACTCAAGAAGCGACAACGATGAAGGAAACAACCAGTGTTCATCTTCCTCTGCTTCGGAGCAAAGGCGAGTGTATTTTCCTCTACTTGCATTAAAAATGCATCAGAGACGAAAATATTTGGAGCTGGCAGACCCAAGGCTTGAAGGGCGTGTCACAAGTGATGAGGTTGAGAAGCTGGTCCGAGTGGCATTGAGTTGCTTACACGAAGAACCGACACTGAGACCCACAATGGAAAACATCGTGGCCATGTTGGAAGGTAGGATGCCTTTGGGAGAGCCGAGGATTGATTCACTGCACTTCTTACGGTTCTATGGGGAGAGATTTACTGAACCTTCAACTGTAGAAGCATCCTCTGAATCAAATCCATTGGTATTGTCATCACAGCAAGGAGGAATCAATAACGGTCATATGACTACTAATGACAGACACAGCCACTTTTCGTGTATCTCTTCACAACAGCTTTCTGGTCCAAGGTAG 2625 0.4381 MDTFSFFFFCLYFCVLLLVCIRVSSPVSSAPVRFHSIFPNFTASHFEFIDSKGVFLESINGTFTASIANSIQQTSQYYFSVTHTFTSKVIWSANRNSPISSSAHLYLTKTGLSIVDESNRKIWSTPELPYKVSAMWLLETGNLILVDERNESLWESFDYPTDTLVMGQRLSVGKSLDAAVSDFNLSVGEHSLSVTDHDAILQWEGMKYWKLSMDTRAFKDTNAQVSFMVMNQTGLYLFGGNGTTVVMQVGLDPSAFKIAKMGFDGKFVILAFGGNRSSSTTEFSTPLEACSTPFVCGKLGLCSASGVCSCVPGFHSEPRTKGTCVPSNTALSLPSACNTNKIDIDKVSSRVSYNTLNPGLDYFATDFIDPVGNGANLSSCANLCTDDCSCLGFFFRNSSGSCYLLKNQIGSMILRSNSGNGLVGSVKVLVSPVQTPQTKKSFPLVGFILIPFSVSMILVALAIVFLRRRKLCKALKNRLGRSDSSSSSELELIPGLPVRFDYEAIAAATENFQTQIGCGGFGTVYKGTLPDKTVVAVKRITSFGTQGKKGFGTEIAVIANIHHVNLVKLKGFCAQGRHRFLVLEYMDRGSLDHLLFNAGPVLEWHERFEIALGTARGLAYLHSGCGHKIIHCDIKPENILLHDKLQAKISDFGLSKLLGPDQSFLFTTLRGTRGYLAPEWLTRSSITDKTDVYSYGMVLLEIVSGRKNSSWQARSTNSRSDNDEGNNQCSSSSASEQRRVYFPLLALKMHQRRKYLELADPRLEGRVTSDEVEKLVRVALSCLHEEPTLRPTMENIVAMLEGRMPLGEPRIDSLHFLRFYGERFTEPSTVEASSESNPLVLSSQQGGINNGHMTTNDRHSHFSCISSQQLSGPR* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02552 874 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 210 IPR036426 -
Pte2g02552 874 Pfam Protein kinase domain 513 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02552 874 SMART serkin_6 510 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02552 874 Gene3D Phosphorylase Kinase; domain 1 474 585 - -
Pte2g02552 874 FunFam serine/threonine-protein kinase PBS1-like 479 585 - -
Pte2g02552 874 MobiDBLite consensus disorder prediction 711 734 - -
Pte2g02552 874 Gene3D - 51 208 - -
Pte2g02552 874 MobiDBLite consensus disorder prediction 829 874 - -
Pte2g02552 874 Pfam D-mannose binding lectin 89 174 IPR001480 -
Pte2g02552 874 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 53 803 - -
Pte2g02552 874 CDD B_lectin 49 160 IPR001480 -
Pte2g02552 874 ProSiteProfiles PAN/Apple domain profile. 337 429 IPR003609 -
Pte2g02552 874 CDD STKc_IRAK 516 802 - -
Pte2g02552 874 PIRSF SRK 5 860 IPR024171 GO:0004674
Pte2g02552 874 SMART blect_4 47 160 IPR001480 -
Pte2g02552 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Pte2g02552 874 FunFam Serine/threonine-protein kinase 586 811 - -
Pte2g02552 874 ProSiteProfiles Protein kinase domain profile. 510 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02552 874 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Pte2g02552 874 ProSiteProfiles Bulb-type lectin domain profile. 40 158 IPR001480 -
Pte2g02552 874 Gene3D Transferase(Phosphotransferase) domain 1 586 806 - -
Pte2g02552 874 SUPERFAMILY Protein kinase-like (PK-like) 485 801 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02552 Pte-Chr2 44616937 44620201 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02552 422 809 Receptor kinase-like Gene Family AT5G20050 38.177 7.37e-77 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pte2g02552 Pkinase 2.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02552 - - jre:109007109 936.791