Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02545 ATGTCTACTTCTGATGGCAGAGATTCTACTGTTGTGATTCTCAGATGGTCTCTCATAGCTGCAAGACTGCCGGGAAGAACTGACAATGAGATTAAAAACTATTGGAACACTCACGTAAAGCGTAAGCTGTACAGCCGAGGAATCGATCCTCAAACTCATCAGCCGCTGAAGGCCACCGCCAAGCTGGCCACCAGTGCCACAACTACCCCGATTGTCGCTGCAAGTGGAAGCAGCAAATTTAATACTGGTGATACTCGCAGAATAAGCAACGAGCTGAGCAATAATATGAAAAGCAACGAAGGTGTTCATCCATTGGTGAGCAACTTCAGTATGAGCTGTTCCAATTCGAAAATAGTGAACGACTCGGCTTGCGAGGATTCGAATAGCAGCTTGACCACTGAGGAAGTGCATCCTCATGAGCTAAACCTCGAGCTCTCTCTATGTCCTCCAGGTCCGCCACAAGTGGCTTCGTCAACTCCAGACGATTTAAAACTGCAACAAAATCGGCCACAGGAGCATGAACAAGAACGTCAACCACAACAGCAGTATAATTATCAGTGGTTTGGGTTTAGTAATGGGAATGTCAATAAACAAGCTGTGTGTTCGTGTCATGGGTTAGGGTTTCAAAGTCAGCAAGCATGTAGTTGCCAGACCATGGGTACTATGGCCTTCGCAACGAGTACTCCGACAACGACGGAAAATGTTTACAGATTTGACAGATCCTGA 726 0.4642 MSTSDGRDSTVVILRWSLIAARLPGRTDNEIKNYWNTHVKRKLYSRGIDPQTHQPLKATAKLATSATTTPIVAASGSSKFNTGDTRRISNELSNNMKSNEGVHPLVSNFSMSCSNSKIVNDSACEDSNSSLTTEEVHPHELNLELSLCPPGPPQVASSTPDDLKLQQNRPQEHEQERQPQQQYNYQWFGFSNGNVNKQAVCSCHGLGFQSQQACSCQTMGTMAFATSTPTTTENVYRFDRS* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02545 241 Pfam Myb-like DNA-binding domain 15 38 IPR001005 -
Pte2g02545 241 SUPERFAMILY Homeodomain-like 15 49 IPR009057 -
Pte2g02545 241 ProSiteProfiles Myb-like domain profile. 15 39 IPR001005 -
Pte2g02545 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 43 IPR017930 -
Pte2g02545 241 MobiDBLite consensus disorder prediction 148 180 - -
Pte2g02545 241 CDD SANT 15 39 IPR001005 -
Pte2g02545 241 Gene3D - 9 66 - -
Pte2g02545 241 PANTHER F14D16.11-RELATED 15 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02545 Pte-Chr2 44526869 44527594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02545 15 159 MYB Transcription Factor Family AT2G16720 39.726 1.12e-22 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte2g02545 Myb_DNA-binding 2.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02545 K09422 - gmx:100808083 180.259