Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02544 ATGGGCAGATCTCCTTGTTGTGAGAAGGAGCACACTAACAAAGGAGCATGGACTAAAGAGGAAGACGAACGACTCATCAACTACATCAAGGCTCATGGTGAAGGCTGCTGGAGATCTCTTCCCAAGGCTGCTGGTTTGCTTAGATGTGGAAAGAGTTGCAGACTTCGATGGATAAACTACTTGAGGCCTGACCTCAAAAGAGGAAACTTCACCGAAGAGGAAGACGAGCTCATCATTAATTTCCACAGCTTACTTGGCAACAAGTATCCAATACCTTCTCTCATTTCCTTGCCTTTTCTTTTCAGTATTAATCTAATTAATTATTCAATCAAATGA 336 0.4226 MGRSPCCEKEHTNKGAWTKEEDERLINYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIINFHSLLGNKYPIPSLISLPFLFSINLINYSIK* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02544 111 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Pte2g02544 111 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 95 - -
Pte2g02544 111 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pte2g02544 111 CDD SANT 16 61 IPR001005 -
Pte2g02544 111 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pte2g02544 111 SUPERFAMILY Homeodomain-like 15 89 IPR009057 -
Pte2g02544 111 Gene3D - 14 66 - -
Pte2g02544 111 SMART sant 13 63 IPR001005 -
Pte2g02544 111 FunFam MYB-related transcription factor 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02544 Pte-Chr2 44526304 44526756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02544 1 108 MYB Transcription Factor Family AT4G38620 81.818 1.43e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte2g02544 Myb_DNA-binding 1.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02544 K09422 - cit:102630891 194.126