Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02543 ATGGATAAGTACGAGATGGTCAAGGATTTAGGAGCTGGGAATTTTGGGGTGGCGAGGCTTATGAGGCAAAAAGAGACCAAAGAGCTCGTAGCCATGAAATACATCGAGCGAGGTCGCAAGATTGACGAAAATGTGGCGAGAGAAATTATAAACCATCGGTCTTTACGGCACCCTAATATTATCCGATTCAAGGAGGTAGTATTGACCCCCACTCACTTGGCAATAGTTATGGAGTACGCAGCTGGAGGAGAGCTCTTTGAGCGAATTTGCAGCGCGGGTAGATTCAGTGAAGATGAGGCAAGATATTTCTTCCAGCAGTTGATCTCTGGTGTCAGTTTTTGTCATTCAATGCAAATTTGCCATAGAGACTTGAAACTTGAAAACACACTTTTAGATGGGAGCCCCGCACCTCGCTTGAAAATTTGTGATTTTGGGTACTCAAAGTCATCTTTGCTGCATTCACGACCCAAATCAACAGTTGGAACTCCAGCATACATAGCCCCTGAAGTTCTCTCCAGGCGTGAATATGATGGCAAGTTGGCTGACGTATGGTCGTGTGGGGTGACTCTCTATGTTATGCTTGTGGGAGCATATCCTTTTGAGGACCAAGATGACCCTAAGAACTTTAGGAAAACAATTCAGCGAATAATGGGTGTTCAGTACAAGATTCCAGACTATGTTCACATATCTCAAGATTGCAGACATTTGCTGTCTCGCATATTTGTTGCAAGTCCATTGAGGAGAATTACTATCAAAGACATCAAAAGCCATCCATGGTTTTTGAAGAATTTACCGAGGGAGCTCACAGAGTCTGCTCAAGCCATTTATTACCAGAGAGATAACCCTAGCTTCTCTGTTCAAAGTGTGGAGGACATAATGAAAGTTGTTGAGGAGGCAAGAAGCCCACCTCCAGTGTCCAGGCCTGTTAGAGGTTTTGGTTTGGAAGATGAAGAAGAAGATGAAGAAGTGAAAGAAGATGAGGTGGAGGAACAAGACGACGAAGAAGAGGACGAGTATGACAAGAGGGTCAAGGAGGTTCATGCTAGTGGTGAATTTCATACCAATTGA 1068 0.441 MDKYEMVKDLGAGNFGVARLMRQKETKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSFCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTIQRIMGVQYKIPDYVHISQDCRHLLSRIFVASPLRRITIKDIKSHPWFLKNLPRELTESAQAIYYQRDNPSFSVQSVEDIMKVVEEARSPPPVSRPVRGFGLEDEEEDEEVKEDEVEEQDDEEEDEYDKRVKEVHASGEFHTN* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02543 355 Coils Coil 314 334 - -
Pte2g02543 355 SUPERFAMILY Protein kinase-like (PK-like) 1 305 IPR011009 -
Pte2g02543 355 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02543 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Pte2g02543 355 MobiDBLite consensus disorder prediction 315 339 - -
Pte2g02543 355 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Pte2g02543 355 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02543 355 MobiDBLite consensus disorder prediction 340 355 - -
Pte2g02543 355 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pte2g02543 355 CDD STKc_SnRK2 3 259 - -
Pte2g02543 355 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Pte2g02543 355 PANTHER SERINE/THREONINE KINASE 3 310 - -
Pte2g02543 355 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Pte2g02543 355 MobiDBLite consensus disorder prediction 300 355 - -
Pte2g02543 355 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Pte2g02543 355 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02543 Pte-Chr2 44490806 44495463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02543 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 42.593 1.04e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pte2g02543 Pkinase 5.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02543 K14498 - qsa:O6P43_030279 621.313