Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02521 ATGGAAAGACGTTGTCCTTCCGAGGATCCGGAAAAGAAAGAGGAGGATCACTTATTTCCTATGTATTCGGTTCGGTCTCAACAAGACATGTCTGTCATGGTCTCGGCCCTTGCTCAAGTTATCGGAGGCAGCAACAGTAACCCAGTTCAACTGCAAGGAGACCCACTACCTATTTCCCAATCCAGTCAAGCACGTAATACTGAACAATCTCAGCAGCTGTCACAAGAACAAGGTAGCTCAAGAGGAAGACACTATAGAGGAGTGAGACAAAGGCCGTGGGGCAAATGGGCTGCAGAGATTCGTGATCCCAAGAAAGCAGCGAGGGTATGGCTCGGAACTTTTACAACAGCTGAGGCTGCAGCACTAGCATACGATGAAGCAGCTCTCAGATTTAAAGGAAGCAAAGCAAAGCTTAATTTTCCAGAAAGAGTTCAAGGGACTAGCCAAATGAGTAGTTACCTGACAAATCAACAAAATGTCTTGGGTGGCATGTCAAGCAGCAAAGAACGGGTTGCAAACACAGATGCACAATCTTATCCCACGTTGTCGCTGTCGCAAGGACCTGCTTACTCTTATGTTGATCCTTTTCAATATTCACAACTTGGTGGGAGTACTCCAGAAAACCGTAACTTCAATTATGGCACGTCTAATCTGTATGGGAGAGCGTTGGGTGGTTCACGGCCTATGTCAAGCACAGCTACATCAACTACATCTTCATCTTCGTCGTCATCTTCGGGATTACCTCAACCAAATCAACAAGACAACCATCTTCAAAGGTATTTAATGCAGTTTGGAGGTTCTTCTAACTCTGATGAGAATTTAGATGATTGA 831 0.4513 MERRCPSEDPEKKEEDHLFPMYSVRSQQDMSVMVSALAQVIGGSNSNPVQLQGDPLPISQSSQARNTEQSQQLSQEQGSSRGRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFTTAEAAALAYDEAALRFKGSKAKLNFPERVQGTSQMSSYLTNQQNVLGGMSSSKERVANTDAQSYPTLSLSQGPAYSYVDPFQYSQLGGSTPENRNFNYGTSNLYGRALGGSRPMSSTATSTTSSSSSSSSGLPQPNQQDNHLQRYLMQFGGSSNSDENLDD* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02521 276 MobiDBLite consensus disorder prediction 221 276 - -
Pte2g02521 276 MobiDBLite consensus disorder prediction 227 276 - -
Pte2g02521 276 SMART rav1_2 84 147 IPR001471 GO:0003700|GO:0006355
Pte2g02521 276 SUPERFAMILY DNA-binding domain 84 142 IPR016177 GO:0003677
Pte2g02521 276 Pfam AP2 domain 84 133 IPR001471 GO:0003700|GO:0006355
Pte2g02521 276 ProSiteProfiles AP2/ERF domain profile. 84 141 IPR001471 GO:0003700|GO:0006355
Pte2g02521 276 FunFam Ethylene-responsive transcription factor 2 83 142 - -
Pte2g02521 276 MobiDBLite consensus disorder prediction 43 89 - -
Pte2g02521 276 CDD AP2 84 142 IPR001471 GO:0003700|GO:0006355
Pte2g02521 276 PANTHER DNA-BINDING DOMAIN 50 235 IPR044808 GO:0003700|GO:0009873
Pte2g02521 276 MobiDBLite consensus disorder prediction 43 81 - -
Pte2g02521 276 Gene3D AP2/ERF domain 83 143 IPR036955 GO:0003700|GO:0006355
Pte2g02521 276 PRINTS Ethylene responsive element binding protein signature 107 123 IPR001471 GO:0003700|GO:0006355
Pte2g02521 276 PRINTS Ethylene responsive element binding protein signature 85 96 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02521 Pte-Chr2 44381119 44383882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02521 18 157 AP2-EREBP Transcription Factor Family AT5G61890 65.035 5.50e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte2g02521 AP2 1.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02521 - - jre:109000456 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02521 2 44381119 44383882 Pte2g02521 2 44381119 44383882 RCT
Pte2g02521 2 44381119 44383882 Pte1g02042 1 41523867 41525572 RCT