Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02513 ATGCGACAGCAGAGTCACGTGCCTTCATCAGTGATATCTACTCACAGTATGCATCTTGGCGTCCTTGCAACTGCTTGGCATGCCGTCTTGACAAAAACCATTTTCACAGTCTATTACAAGCCTAGGACTAGCCCAGCTGAGTTCATTGTTCCATTTGACCAGTACATGGAGTCTCTGGAGAACAGCTACACCGTCGGGATGAGGTTCAAAATGAGGTTTGAAGGTGAAGAAGCGCCAGAGCAGAGGTTTACTGGTACTATTGTTGGAGTTGAAGATGCTGACCCTAGGAGGTGGGCAGATTCCAAATGGAGATGCCTCAAGGTAAGGTGGGATGAGACATCTTCAATACCACGACCTGAGAGGGTCTCTCCTTGGAAAATAGAACCTGCAATTGCTCCTCCGAACCTTAACCCCCTTGCAATGCCAAGGCTTAAAAGGCAACGAACTAATATGATTCCTTCATCCACCGACTCCTCTGTTCTTACTCGAGAAGTTGCATCTAAAGTAACCATGGACCCTTCATCAGCTAGTGGATTTTCAAGGGTCTTGCAAGGCCAAGAATTCACGACCTTGAGAGGGAACGTTGCTGACAGTAACGAGTCTGACAGAGCAGAAAGGTCTGTTGTCTGGCCACCTGCTTCAGATGACGAAAAGATGGATGTGGTTTCAGCATCGAGAAGATATGTGCCGGAAAATTGGATGTCCGTGGGGAGGAATGAGCCAATTTACTCAGACATGATATCTGGCTTCGGATCCAATTATGATACTTCCAAGGCTGATACTTCTCACAATATTGTTCCATCCTCAGTTGATCAAACTGCCAGCCCAGGGATAAAACATGCAATCGAGGATGGCAGATTTGCCAACTCCTGGTCTTTGATGCCTTGTAATCTTTCACTTAATATGGATTCAAACCTAAAAGGTTCAACTTCAGGTTCTGATATATATCAAGCTCGAGGGAATGCTAGATTTAATACATTTGGAGAGGACACTGTATTCCACGGACATAGAATTGAGCATCAAAATGGAAAGATGCGTTCTCCACCTTTAACTCAATTTGCAGGATCCTTGATAAGAGAATCATTTCCAAAACTTGTTTCTGCAAATTCATTTGAATCTGCAAAACCAAGAGATGGGAACTGTAAGCTCTTTGGTATACCCCTCATCAGTTACCCAGTCACATTGGAGCATGCTGTATCACAAAGCAACACGAAAAGTAATCCATCTGATAAATTGCAAGGTATATCACCTCGATCGATGTGTGAATCTGATCAGATATCAGAACAGTCAATGAGTGGAAAGGCCACTGATGTTTTAGCTGATAAAAACGAAAGGGAGAAATCATTACAGAGTTATCAGCAAAATTCAAAAGATGCTCAAGCTAAACCTGCTGGTGGTTCAACTAGGAGTTGCACAAAGGTTCACAAAAAGGGGATTGCACTAGGTAGGTCTGTGGACCTCACTAAATTTAACAACTATAATGATCTGATCGTTGAATTGGACCAGCTGTTTGATTTTGGAGGTGAATTGATGTCTCCCAAGAAGGTTTGGCTTATTGTCTATACAGACAATGAGGGTGATATGATGCTTGTTGGAGATGACCCTTGGCAGGAATTTTCTGCCATGGTGCGCAAAATTTTCATCTATCCCAAAGAAGAGATTCAGACCATGAGCCCAGGGGTTCTAGATTCAAAGGGTGAAGAGAATATTGAAGGTACCTGTGTTAGAGAAATAAAAAGTCAGCCTCTTCATCGAGTTCCTGCTCAGCTTGACTCCTATCTAGGTAATAATCCAATGGCTTGGAACATTGATCCGGTGATTCAATTAGGGAGTCTTTAA 1839 0.4318 MRQQSHVPSSVISTHSMHLGVLATAWHAVLTKTIFTVYYKPRTSPAEFIVPFDQYMESLENSYTVGMRFKMRFEGEEAPEQRFTGTIVGVEDADPRRWADSKWRCLKVRWDETSSIPRPERVSPWKIEPAIAPPNLNPLAMPRLKRQRTNMIPSSTDSSVLTREVASKVTMDPSSASGFSRVLQGQEFTTLRGNVADSNESDRAERSVVWPPASDDEKMDVVSASRRYVPENWMSVGRNEPIYSDMISGFGSNYDTSKADTSHNIVPSSVDQTASPGIKHAIEDGRFANSWSLMPCNLSLNMDSNLKGSTSGSDIYQARGNARFNTFGEDTVFHGHRIEHQNGKMRSPPLTQFAGSLIRESFPKLVSANSFESAKPRDGNCKLFGIPLISYPVTLEHAVSQSNTKSNPSDKLQGISPRSMCESDQISEQSMSGKATDVLADKNEREKSLQSYQQNSKDAQAKPAGGSTRSCTKVHKKGIALGRSVDLTKFNNYNDLIVELDQLFDFGGELMSPKKVWLIVYTDNEGDMMLVGDDPWQEFSAMVRKIFIYPKEEIQTMSPGVLDSKGEENIEGTCVREIKSQPLHRVPAQLDSYLGNNPMAWNIDPVIQLGSL* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02513 612 Gene3D - 62 132 - -
Pte2g02513 612 FunFam Auxin response factor 62 134 - -
Pte2g02513 612 Pfam AUX/IAA family 517 557 IPR033389 -
Pte2g02513 612 Pfam AUX/IAA family 449 505 IPR033389 -
Pte2g02513 612 SUPERFAMILY CAD & PB1 domains 469 546 - -
Pte2g02513 612 Coils Coil 442 462 - -
Pte2g02513 612 ProSiteProfiles PB1 domain profile. 469 553 IPR000270 GO:0005515
Pte2g02513 612 MobiDBLite consensus disorder prediction 400 436 - -
Pte2g02513 612 FunFam Auxin response factor 465 558 - -
Pte2g02513 612 MobiDBLite consensus disorder prediction 400 470 - -
Pte2g02513 612 Pfam Auxin response factor 25 107 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pte2g02513 612 Gene3D - 465 558 - -
Pte2g02513 612 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 558 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pte2g02513 612 MobiDBLite consensus disorder prediction 449 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02513 Pte-Chr2 44317944 44320947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02513 1 580 B3 DNA Binding Superfamily AT5G62000 53.923 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02513 - - qsa:O6P43_023511 732.25