Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02508 ATGAAAGTACCATGTTGTTCTGTATGCCAGACTAGGTACAACGAAGATGAAAGGGTCCCGCTTTTACTTCAATGTGGACATGGATTTTGTAAAGAGTGTCTTTCTAGGATGTTCTCTGCTTCCCCAGACACAACGTTGCCATGTCCGAGGTGTCGTCATGTGTCGGTTGTTGGGAACTCAGTTCAAGCTTTGAGGAAAAACTATGCTGTGCTTGCTCTGATTCACTCGGCTTCAAATACTTCTGGTGGCAACTTTGACTACGATCACACTGATGATGAGGAAGATGGTGGTGAAAATGAGGATGGTGGTGATAATGATGAGGACTTGGTTTTGCGAAGGCGGTGGTGTAGTCGTGGATCACAGGCATCTAGTTCAGGTGGATGTGGGCCGGTGATCGAGGTTGGAGTGCATCATGAGTTGAAATTGGTGAGTAAGATAGGAGAGGGCAGAAGGGCTGGAATTGAAATGTGGACGGCAGTGATTGGTGGTGGTGAGGGTGGGCGGTGCAGGCATCATGTGGCGGTCAAGAAGGTGTCAGTAATGGATGATATGGATTTAGATTGGGTACAAGAGAAGCTTGAACACTTGCGGAGAGCTTCAATGTGGTGCAGAAATGTGTGTACTTTTCATGGTGCTGTGAGGATGGAGGGAAGTTTTTGTCTTGTAATCGATAGATGTTATGGGTCTATACAATCTGAGATGCAGAAAAATAAGGGCAGGCTTACTTTGGAGCAAATTCTAAGATATGGGGCTGATATTGCTCGAGGAGTAGCTGAACTTCATGCAGCAGGTGTTGTATGTATGAGTTTAAAACCATCCAATCTTCTTCTGGATGCTAGTGGTCATGCTGTGGTTTCTGATTATGGAATTGCCTCCATCCTGAAGAAACCTTCGTGTCGGAAAGCCAGACTAGAGTGTGATTCTTCAAAAGTCCATTCATGTATGGAGTGTACAATGCTCAGCCCACACTATGCAGCTCCTGAGGCATGGGAACCGGTAAAGAAGTCATTAAACTTATTCTGGGATGATGCAATGGGCATATCTGCAGAGTCAGATGCATGGAGTTTTGGTTGTACATTGGTACAGATGTGCACTGGTTCCATTCCTTGGTCTGGTTTAAGTGCAGAGGAGATTTACAGAGCCGTTGTTAAGGCACGGAAATTGCCTCCACAATATGCAAGTGTTGTTGGTGTTGGCATGCCTAGGGAACTGTGGAAAATGATTGGTGACTGTTTTCAGTTTAAGGCAGCAAAAAGACCAACTTTTAATGCCATGTTAGCAATATTTCTCCGCCATTTGCAGGAGATACCTCGCAGTCCTCCTGCAAGCCCTGACAATGACCTTTCTAAATCTTCTGTTTCAAATGTGTTGGAACCATCACCTTCATCTGATTCTGAGATTTCTCAAGAAAATCCAAACCATCTTCATCAACTTGTATCTGAAGGCAATGTGATAGGTGTTAGGGACCTCCTTGCTAAGGCTGCATCAGGAAACAGTAACAACTCAGTATATTACCTACTTGAAGCTCAAAATACTGATGGCCAAACAGCCCTCCACTTAGCTTGCAGACGTGGCAGTGCGGAACTTGTAGAGTCTATTTTGGAGTATAGAGAGGCAAATGTTGATGTCCTCGACAAAGATGGAGATCCTCCACTTGTGTTTGCTTTGGCAGCTGGATCCCCTGAATGTGTCCGTAGTCTGATCAATAGAGGTGCTAACGTCAGCTCTGGTCTTAGAGATGGCCTCGGGCCCTCTGTGGCTCATGTTTGTGCCTACCATGGCCAACCTGATTGCATGCGTGAATTATTGCTGGCTGGAGCAGATCCTAATGCTGTTGATGATGAAGGTGAGACTGTACTGCACAGAGCTGTTGCCAAGAAGTATACTGATTGTGCTCTTGTAATATTGGAAAGTGGGGGTTGCAGTTCAATGGGCATTTTAAATGCGAAAAAATTGACTCCATTGCATTTGTGTGTGGCTACATGGAATGTTGCTGTGGTTAAAAGGTGGGTAGAAGTTGCAACTCCAAAAGAAGTGGCTGATGCTATTGATGTAAAAAGCCCCGTTGGCACTGCATTATGTATGGCAGCTGCGGTGAAGAAAGATCATGAAATTGAAGCAAGGGAACTGGTCAAGATACTGCTTGCAGCAGGTGCAAATCCATTTGCTCTAGATACTCAGCATGGTCGGACAGCTTTGCATGCAGCTGCCATGGCTAATGATGTTGAGTTGGTAAAGATTATTCTTGATGCTGGTGTTGATGTAAACATCCGGAATGGGCATGGTACCACATCTTTGCATGTTGCATTGGCCAGGGGGGCTAATTCTTGTGTCAAGTTGCTTCTATCTGCTGGTGCTGATTACAATTGGCAGGATGACGAAGGTGACAATGCTTTTCATATAGCCGCAGATGCTGCAAAAATGATACGTGAAAACCTTGACTGGCTTATTGTGATGCTAAGGAATTCTGATTCTGCTGTTCACGTCAGAAACCATAGGCAAACATTACGAGACTTCTTGGAAATGCTTCCTAGAGAGTGGATTTCTGAAGATTTGATGGAGGCACTCATACAAAGAGAAGTTTATCTGTCTCCTACAATATTTGAAGTGGGAGACTGGATCAAATTCAAGAAGACTGTGATTACTCCAACTTATGGGTGGCAAGGTGCTGGGCATAAGAGTGTTGGATTTGTACAAAGTGTTCCTGACAAGGACAATCTAATTGTCTCATTCTGTTCTGGAGATGCCCGTGTTTTGGCAACTGAAGTTATAAAAGTGATTCCATTAGACAGGGGACAGCATGTACAGCTAAAAGCAGATGTAGCAGAACCCAAGTTTGGTTGGCGTGGCCAATCACGGGACAGCATTGGAACAGTTTTATGTGTTGATGATGATGGTATACTTAGGGTTGGTTTTCCTGGAGCTTCCAGAGGATGGAAAGCTGACCCTGCTGAGATGGAGAGAGTTGAGGAATTCAAGGTTGGTGATTGGGTTCGTATCCGTCCTACTCTTACAAGTGCAAAGCATGGATTAGGATCTGTCACACCAGGAAGCATTGGGATTGTATATTGTATCAGACCAGATAGTAGTCTCTTGCTAGAGCTTAGTTATCTTCCTAACCCGTGGCATTGTGAGCCAGAGGAGGTTGAACCAGTCGCTCCTTTTAGGATTGGTGATCGGGTATGTGTTAAGAGATCAGTTGCAGAACCTAGATATTTATGGGGTGGTGAAACACATCATAGTGTGGGAAGAATTAGTGAGATAGAAAGTGACGGTCTCCTCCTCATTGAAATACCAAATCGCCCTATCCCATGGCAGGCTGACCCCTCTGATATGGAGAAGGTTGAAGATTTTAAGGTTGGAGACTGGGTTAGAGTAAAGGCTTCAGTACCTTCACCAAAATATGGATGGGAGGACATCACAAGGAACAGCGTTGGTATCATTCATAGTTTAGAGGAAGATGGTGATATGGGCATTGCCTTTTGCTTCAGGAGCAAGCCTTTTGTTTGTTCTATGACAGATGTTGAGAAAGTTCCCCCTTTTGAGGTGGGGCAAGAGATCCACGTGATGCCATCTGTTTCTCAACCTCGTCTTGGATGGTCAAGTGAAACTCCTGCAACTATTGGAAAACTTGTGACAATTGACATGGATGGGGCTCTAAATACGTGA 3669 0.4475 MKVPCCSVCQTRYNEDERVPLLLQCGHGFCKECLSRMFSASPDTTLPCPRCRHVSVVGNSVQALRKNYAVLALIHSASNTSGGNFDYDHTDDEEDGGENEDGGDNDEDLVLRRRWCSRGSQASSSGGCGPVIEVGVHHELKLVSKIGEGRRAGIEMWTAVIGGGEGGRCRHHVAVKKVSVMDDMDLDWVQEKLEHLRRASMWCRNVCTFHGAVRMEGSFCLVIDRCYGSIQSEMQKNKGRLTLEQILRYGADIARGVAELHAAGVVCMSLKPSNLLLDASGHAVVSDYGIASILKKPSCRKARLECDSSKVHSCMECTMLSPHYAAPEAWEPVKKSLNLFWDDAMGISAESDAWSFGCTLVQMCTGSIPWSGLSAEEIYRAVVKARKLPPQYASVVGVGMPRELWKMIGDCFQFKAAKRPTFNAMLAIFLRHLQEIPRSPPASPDNDLSKSSVSNVLEPSPSSDSEISQENPNHLHQLVSEGNVIGVRDLLAKAASGNSNNSVYYLLEAQNTDGQTALHLACRRGSAELVESILEYREANVDVLDKDGDPPLVFALAAGSPECVRSLINRGANVSSGLRDGLGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGETVLHRAVAKKYTDCALVILESGGCSSMGILNAKKLTPLHLCVATWNVAVVKRWVEVATPKEVADAIDVKSPVGTALCMAAAVKKDHEIEARELVKILLAAGANPFALDTQHGRTALHAAAMANDVELVKIILDAGVDVNIRNGHGTTSLHVALARGANSCVKLLLSAGADYNWQDDEGDNAFHIAADAAKMIRENLDWLIVMLRNSDSAVHVRNHRQTLRDFLEMLPREWISEDLMEALIQREVYLSPTIFEVGDWIKFKKTVITPTYGWQGAGHKSVGFVQSVPDKDNLIVSFCSGDARVLATEVIKVIPLDRGQHVQLKADVAEPKFGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLLELSYLPNPWHCEPEEVEPVAPFRIGDRVCVKRSVAEPRYLWGGETHHSVGRISEIESDGLLLIEIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVPSPKYGWEDITRNSVGIIHSLEEDGDMGIAFCFRSKPFVCSMTDVEKVPPFEVGQEIHVMPSVSQPRLGWSSETPATIGKLVTIDMDGALNT* 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02508 1222 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 1221 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Pte2g02508 1222 ProSiteProfiles Ankyrin repeat profile. 547 579 IPR002110 GO:0005515
Pte2g02508 1222 SUPERFAMILY RING/U-box 5 57 - -
Pte2g02508 1222 MobiDBLite consensus disorder prediction 444 471 - -
Pte2g02508 1222 ProSiteProfiles Ankyrin repeat profile. 582 614 IPR002110 GO:0005515
Pte2g02508 1222 ProSiteProfiles Ankyrin repeat region circular profile. 547 575 - -
Pte2g02508 1222 Gene3D - 428 643 IPR036770 -
Pte2g02508 1222 FunFam E3 ubiquitin-protein ligase KEG 453 683 - -
Pte2g02508 1222 PRINTS Ankyrin repeat signature 514 529 IPR002110 GO:0005515
Pte2g02508 1222 PRINTS Ankyrin repeat signature 777 791 IPR002110 GO:0005515
Pte2g02508 1222 Pfam RING-type zinc-finger 6 49 IPR027370 -
Pte2g02508 1222 MobiDBLite consensus disorder prediction 439 471 - -
Pte2g02508 1222 FunFam E3 ubiquitin-protein ligase KEG 727 859 - -
Pte2g02508 1222 ProSiteProfiles Ankyrin repeat region circular profile. 761 793 - -
Pte2g02508 1222 SMART ANK_2a 794 829 IPR002110 GO:0005515
Pte2g02508 1222 SMART ANK_2a 761 790 IPR002110 GO:0005515
Pte2g02508 1222 SMART ANK_2a 470 501 IPR002110 GO:0005515
Pte2g02508 1222 SMART ANK_2a 688 723 IPR002110 GO:0005515
Pte2g02508 1222 SMART ANK_2a 547 576 IPR002110 GO:0005515
Pte2g02508 1222 SMART ANK_2a 650 679 IPR002110 GO:0005515
Pte2g02508 1222 SMART ANK_2a 615 646 IPR002110 GO:0005515
Pte2g02508 1222 SMART ANK_2a 513 543 IPR002110 GO:0005515
Pte2g02508 1222 SMART ANK_2a 582 611 IPR002110 GO:0005515
Pte2g02508 1222 SMART ANK_2a 728 757 IPR002110 GO:0005515
Pte2g02508 1222 Gene3D - 765 818 IPR036770 -
Pte2g02508 1222 Pfam Ankyrin repeats (many copies) 585 632 IPR002110 GO:0005515
Pte2g02508 1222 SUPERFAMILY Protein kinase-like (PK-like) 139 464 IPR011009 -
Pte2g02508 1222 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Pte2g02508 1222 ProSiteProfiles Protein kinase domain profile. 140 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02508 1222 Pfam Mind bomb SH3 repeat domain 868 986 IPR040847 -
Pte2g02508 1222 Pfam Mind bomb SH3 repeat domain 992 1112 IPR040847 -
Pte2g02508 1222 Pfam Mind bomb SH3 repeat domain 1118 1220 IPR040847 -
Pte2g02508 1222 MobiDBLite consensus disorder prediction 83 106 - -
Pte2g02508 1222 Gene3D - 644 764 IPR036770 -
Pte2g02508 1222 Pfam Protein kinase domain 170 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02508 1222 SMART ring_2 6 51 IPR001841 -
Pte2g02508 1222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 84 IPR013083 -
Pte2g02508 1222 CDD RING-HC_KEG-like 3 59 - -
Pte2g02508 1222 ProSiteProfiles Ankyrin repeat profile. 761 793 IPR002110 GO:0005515
Pte2g02508 1222 ProSiteProfiles Ankyrin repeat profile. 513 546 IPR002110 GO:0005515
Pte2g02508 1222 ProSiteProfiles Ankyrin repeat profile. 728 760 IPR002110 GO:0005515
Pte2g02508 1222 ProSiteProfiles Ankyrin repeat region circular profile. 513 535 - -
Pte2g02508 1222 MobiDBLite consensus disorder prediction 88 105 - -
Pte2g02508 1222 ProSiteProfiles Ankyrin repeat region circular profile. 728 759 - -
Pte2g02508 1222 Pfam Ankyrin repeats (3 copies) 492 575 IPR002110 GO:0005515
Pte2g02508 1222 Pfam Ankyrin repeats (3 copies) 707 791 IPR002110 GO:0005515
Pte2g02508 1222 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Pte2g02508 1222 Gene3D Transferase(Phosphotransferase) domain 1 132 427 - -
Pte2g02508 1222 FunFam E3 ubiquitin-protein ligase KEG 227 443 - -
Pte2g02508 1222 SUPERFAMILY Ankyrin repeat 492 803 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02508 Pte-Chr2 44259179 44270644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02508 729 835 MAP Kinase Kinase Kinase AT4G18950 29.730 7.74e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Pte2g02508 Pkinase 5.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02508 K16279 - qsa:O6P43_001491 2130.14