Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02485 ATGGGTTGCGTTTTATCAACGCCAGCGGAGGATCATGGGCCCCGCAGTACGTCCTCCCGAGATAAGAGACGTCGGGATGGCGGGAGAAAACAATTTGGTGCTGACGCAGGTGATGCCCGTACGGTCCGGAAGGAGGTGAAGGAGACAGAGTCTCAGGTAACTCGGAGAACCGCCAACTTAACTGTTAATGTCCCCCAGCCGGAGCTACGAAGACCTAGGTGGGATCAATGCGTAACTAACCAACAAGGTTGGCCGTCATGGTTGCTCGCAGTCGCCGGTGAAGCCATACAAGGTTGGACGCCCCGTCGAGCTAACACATTCGAGAAGCTTGCTAAGATTGGGCAAGGGACTTATAGCAACGTATATAAGGCTAGAGATCTTGTAACTGGGAAGACGGTGGCTTTGAAGAAAGTTCGATTTGATAATTTGGAACAGGAAAGTGTCAAATTCATGGCCAGGGAGATCCTTGTGCTGAGAAAGCTTGATCACCCCAATGTAATTAAACTAGAAGGTTTAGTTACTTCAAGAATGTCTTGTAGCCTTTACTTGGTATTCGAATATATGGAACACGATCTTGCTGGTCTTGCTGCTAGTCAAGGGGTCAGGTTCACTGAACCCCAGGTTAAGTGCTACATGAAGCAATTACTTTCTGGACTTGAGCATTGTCACACCAGAGGTGTCTTGCACCGTGATATCAAGTGCTCAAATCTGCTTATTGACAATGAAGGAGTCCTAAAAATAGCAGATTTTGGTCTAGCTACTTTCTATGAACCTGGGCAAAAGCAGCCCATGACAAGTAGAGTTGTCACCCTCTGGTACCGCCCCCCTGAACTCCTTCTTGGAGCCACTTCGTATGGCCCTGGTATCGACCTTTGGAGTGCTGGGTGCATTTTAGCGGAACTTCTTGCTGGCAAGCCAATATTACCAGGCCGCACAGAGGTAGAACAACTGCATAAGATATTCAAGTTATGTGGCTCTCCAACTGAGGAATATTGGAAGAAACACAGATTGCCAAATGTGACCCTTTTTAAGCCTCAGCTGCCATATAAACGTTGCATAGCTGAAACCTTCAAGGACTTCCCCCCTTCTTCGGTACCTCTGATTGAAGCTCTTCTTGCAATAGATCCTGTTGAACGTGGCACTGCCACTGCTGCTCTGAATAGTGAATTTTTTACAACCGAGCCTCATGCTTGTGAGCCTTCAAGCTTACCAAAGTTTCCTCCAACCAAGGAGTTGGATATAAAACTCAGAGATGAAGAAGCAAGAAGGCAGAAGAGTCTTGGCAAAAAAGCTAATGCAGCTGATGGGACAAGAAGGGTCAGACACCGTGAGCATGGTCGGGCGATTCCAGCTCCAGAAGCCAATGCAGAAATCCAATCAAATTTAGATAGATGGAGATCTGTTACCCATGCAAATGCCAAAAGCAAGAGTGAGAAATTTCCACCTCCACACCAGGACGGGGCAGTGGGATATCCATTAGAGTCATCAGAGAAAGTTCCCGTGTCGTTTGGCGTTTCTGATGCTTCTTTCAGCTCTGCGATATTCAACACAAAGTCATCTGATTCTGCTAGAAGTGTTGGGGCTGCTGGGGGACCTTCCAGTCGGAAGAAAACAAATAAAGCAAACCCGAAGATGACTTCTTGGAAATTTATGCGCTCATTCAAGCCATCATCAGCAGGGCTATCGATGAATTTAATGTTTAGGGGTAAATAG 1713 0.4699 MGCVLSTPAEDHGPRSTSSRDKRRRDGGRKQFGADAGDARTVRKEVKETESQVTRRTANLTVNVPQPELRRPRWDQCVTNQQGWPSWLLAVAGEAIQGWTPRRANTFEKLAKIGQGTYSNVYKARDLVTGKTVALKKVRFDNLEQESVKFMAREILVLRKLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASQGVRFTEPQVKCYMKQLLSGLEHCHTRGVLHRDIKCSNLLIDNEGVLKIADFGLATFYEPGQKQPMTSRVVTLWYRPPELLLGATSYGPGIDLWSAGCILAELLAGKPILPGRTEVEQLHKIFKLCGSPTEEYWKKHRLPNVTLFKPQLPYKRCIAETFKDFPPSSVPLIEALLAIDPVERGTATAALNSEFFTTEPHACEPSSLPKFPPTKELDIKLRDEEARRQKSLGKKANAADGTRRVRHREHGRAIPAPEANAEIQSNLDRWRSVTHANAKSKSEKFPPPHQDGAVGYPLESSEKVPVSFGVSDASFSSAIFNTKSSDSARSVGAAGGPSSRKKTNKANPKMTSWKFMRSFKPSSAGLSMNLMFRGK* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02485 570 SMART serkin_6 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02485 570 MobiDBLite consensus disorder prediction 422 450 - -
Pte2g02485 570 Pfam Protein kinase domain 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02485 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Pte2g02485 570 MobiDBLite consensus disorder prediction 14 51 - -
Pte2g02485 570 ProSiteProfiles Protein kinase domain profile. 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02485 570 MobiDBLite consensus disorder prediction 1 51 - -
Pte2g02485 570 Gene3D Transferase(Phosphotransferase) domain 1 190 431 - -
Pte2g02485 570 PANTHER CELL DIVISION PROTEIN KINASE 105 395 - -
Pte2g02485 570 FunFam probable serine/threonine-protein kinase At1g54610 190 431 - -
Pte2g02485 570 CDD STKc_CDK9_like 107 391 - -
Pte2g02485 570 Gene3D Phosphorylase Kinase; domain 1 94 189 - -
Pte2g02485 570 MobiDBLite consensus disorder prediction 422 492 - -
Pte2g02485 570 SUPERFAMILY Protein kinase-like (PK-like) 100 396 IPR011009 -
Pte2g02485 570 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Pte2g02485 570 FunFam probable serine/threonine-protein kinase At1g54610 94 189 - -
Pte2g02485 570 MobiDBLite consensus disorder prediction 520 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02485 Pte-Chr2 44102096 44106767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02485 99 430 Core Cell Cycle Gene Families AT5G10270 51.437 3.16e-118 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte2g02485 Pkinase 4.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02485 K08819 - qsa:O6P43_023529 868.611