Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02484 ATGAACAGATTTAATTTTGTCACAGATGGAGCCACCAAATTACCTCCAGGTTTTCGTTTTCAGCCAACAGATGAAGAGCTTGTTTTCCAATATTTGAAGAGTCAACCTGAGCAAGACAGATATTTTGTCAGCTATAAAGAAGCAAAATATCGAAATGGGAATCGTATGAACAGATCAACCAATTCGGGGTATTGGAAGGCTACTGGGGCAGACAAAAGAATTTCATCTTCTAGAAGATGGAATGACATTGTGGGGATAATGAAAACGCTTGTTTTCTACGAAGGCAAGTCTCCACATGGCACAAGAACGGACTGGGTCATGCATGAATATCGCCTTGTCTACAATGGAACCAGCGCTCGTGGTCTTTCGTATATGTCTGTAGATTATATTTCCACTAATGCTTTTGCAGAATCCCGAAAACGAAAGAGACTGGGTTTGTGTCGCTTATTTTTGAAAAAAAGAAGTGGAGATTCTGCTAAACAGGATGATTCTATTCAAAAGCGGAATAGGGTGGTAGAGAGCATGGAAATGGCTCAACCAAGATTCTTTGATTTGATGATGGTTCACGGTAATGGTGCAGGCCAGGTTGTTTCATCTACATCGTCTTCCTCAAGTTTCAGTAGTATGACGGTCACTTCTTCTCTCGTGATACCCCATAGCTCGGTCTCAACCCCCATCTGCAAGCTCTCCAACCACGGGCTAGTCGGCTGTGACCCAGTGCCGTCCAGACCATGA 735 0.4327 MNRFNFVTDGATKLPPGFRFQPTDEELVFQYLKSQPEQDRYFVSYKEAKYRNGNRMNRSTNSGYWKATGADKRISSSRRWNDIVGIMKTLVFYEGKSPHGTRTDWVMHEYRLVYNGTSARGLSYMSVDYISTNAFAESRKRKRLGLCRLFLKKRSGDSAKQDDSIQKRNRVVESMEMAQPRFFDLMMVHGNGAGQVVSSTSSSSSFSSMTVTSSLVIPHSSVSTPICKLSNHGLVGCDPVPSRP* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02484 244 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 36 - -
Pte2g02484 244 Pfam No apical meristem (NAM) protein 37 112 IPR003441 GO:0003677|GO:0006355
Pte2g02484 244 SUPERFAMILY NAC domain 10 152 IPR036093 GO:0003677|GO:0006355
Pte2g02484 244 Gene3D NAC domain 33 156 IPR036093 GO:0003677|GO:0006355
Pte2g02484 244 ProSiteProfiles NAC domain profile. 1 152 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02484 Pte-Chr2 44089684 44091096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02484 1 157 NAC Transcription Factor Family AT5G13180 48.370 5.54e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte2g02484 NAM 3.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02484 - - qsa:O6P43_023531 209.92