Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02477 ATGGATGAGGTTAAGCCCCTGAGGGCCTTCAAGCCATGTCTTTCCTCAGCTGAACTGAGAGAGAGTAGTACTGCTTTCCCAGTTCCTTATAGATCCGATGAGGTTGACGGTGTTCAAAGCCTTTATGTTTTCTGTTCCAGTCTAGTCGTTTTCTTATCTCTCTCCACTTTGATCACTACCCGTCCCCTCTCTAGCTTCTATGTCTGGTCACTTTTGCTTGCATATAGTCTTGGTGTGAAGGTAAGCGTCCCATGCAGCAACCAATTCAACATAGTGACTGTGAGATGCGGGCATTGTGCCAATTTGTTGTCAGTTAACATGGGGCAAACCCTTCAGACCTACCCTCAAGATCCTCAGAAACAACCCCAGGTCTCTGAAGATTCTGGCAATAAGGAGTTTGGATCATCTTCAAAATGCAATAAATTCAGTCCATTTGGGACTGAAGAACATGAAGAAACCAGAATGCCTCCAATTCGTCCCCCTGAGAAGAGACACCGGGTCCCTTCTGCATATAATCGTTTCATAAAGGAGGAAATTCAAAGAATTAAGGCCAGTAATCCAGATATCAGCCATAGAGAGGCCTTCAGCACAGCAGCCAAAAATTGGGCACATTTCCCTCACATTCACTTTGGACTAAAACTGGATGGAAACAAGCAAGCAAAGTTGGACCAGACTATTTCGGGCGAAGGGACTCAAAAATCTAATGGTTTCTACTGA 717 0.4477 MDEVKPLRAFKPCLSSAELRESSTAFPVPYRSDEVDGVQSLYVFCSSLVVFLSLSTLITTRPLSSFYVWSLLLAYSLGVKVSVPCSNQFNIVTVRCGHCANLLSVNMGQTLQTYPQDPQKQPQVSEDSGNKEFGSSSKCNKFSPFGTEEHEETRMPPIRPPEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDQTISGEGTQKSNGFY* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02477 238 MobiDBLite consensus disorder prediction 144 166 - -
Pte2g02477 238 MobiDBLite consensus disorder prediction 113 143 - -
Pte2g02477 238 CDD HMG-box_SF 166 202 - -
Pte2g02477 238 Gene3D High mobility group box domain 148 208 IPR036910 -
Pte2g02477 238 PANTHER PROTEIN YABBY 6-RELATED 80 221 IPR006780 GO:0007275
Pte2g02477 238 Pfam YABBY protein 80 212 IPR006780 GO:0007275
Pte2g02477 238 MobiDBLite consensus disorder prediction 113 166 - -
Pte2g02477 238 FunFam axial regulator YABBY 5-like 150 208 - -
Pte2g02477 238 SUPERFAMILY HMG-box 157 205 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02477 Pte-Chr2 44026672 44034258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02477 79 239 C2C2-YABBY Transcription Factor Family AT1G08465 61.538 4.17e-62 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pte2g02477 YABBY 2.6e-57 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02477 K25796 - qsa:O6P43_000542 263.848