Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02455 ATGGTTTCCACGAGACGGAGTGGATCTCTCTCCGGCAACAATACCAAAAGATCTTCTTCTTCGGGGGATAAACCTCTCTCACCTAAACGCCAGAAGGTCGATAATGGTGGGTCGTCGCAGAAACCGACGCCGGCGACAGAGAATTCTAAACAACTGTGCTCCTCCGCGCCGCCGGCTGATCCTGGGGAATGTGGTTCCACAGATGCTACTGTCGTTGGTGACGCTGTGACGGCAGGGCAAGCTGATGCTCAGCCGGCTTTGGCTTTGGCACCTCCGATCGCTGATGGTTCTTCCCCCACTTTGGCTGTTGACAAGACCAGGAGTTCAATTTCTGCGTGGAGTATATATCAGAAGCAGAACCCGAGTTTTGACTCGTCAACTCCCTGGTGCAAGCTTCTAGCACAGTCTGGGCAGAATCCTAATGTTCCCATTTGTACGGCGAACTTTACCATTGGCTCCAATAAAACCTGTAACTTTCAGGTGAAGGATCAAATTGTCAGTACAACCCTCTGCAAGATAAGGCATACTCAGCGCGAGGGGAGTACTGTAGCTGTGCTAGAAAGTACGGGCAGTAAAGGGCTTGTGCTTGTGAACGGGACACCTGTTAAGAAGAATACAAGCTGTATGCTTAATTCTGGTGATGAGGTCACCTTCGGCGTGCTGGGGAACCATGCTTACATCTTTCAGCAACTGAATAATGAGGTCGCGATGAAGGGAGTAGAAGTTCAGAATGGTGTTGGGAAGCTTCTGCATCCTGAAAGGAGAGCAGGAGATCCTTCAGCTGTGGCTGGGGCATCCATTTTGGCATCCCTTTCTACCAGTCTGACTCCAAGATGGAAGACCCCATCACAGACTGCTAGCAAAATTCAACAGAGTGTTGATGTTCCCGTTAATTCTGATATTCAAGTTGGTGCAGAAATTATGCTCGATGGCCCTGATGTAAACCCAGTTCTAAACACCACAAGTGAAAAAGTACCTGATGTAGGAACAGATGACAAAAGTTCTCCTGTGGATTGCGACCCAGAAGCTGGCACAGAGGCAGGCAATGTAATGGAAGAAAGAAATGGAACGAGGGATCTGCAGCCAGCATCGACATCGGGCATGACTCTGCGATGCGTTGTGTTTAAAGATGATGTCAATGCTGCAATTCTCAATGGCAGGGAAATAGAAGTCTCTTTTGATAATTTTCCCTATTATTTGAGCGAAAATACAAAAAATGTTCTCATTGCAGCTTCATTTATACACTTGAAGCACAAGGAGCATGCAAAGTACACATCAGAGCTTACTACAATAAATCCACGTATCTTGCTTTCTGGTCCTGCAGGGTCTGAGATATATCAGGAAATGTTGGCAAAAGCACTAGCTAATTACTTTGGGGCTAAGTTGCTCATATTTGATAGCCACTCATTTTTGGGTGGTTTGTCATCAAAGGAAGCTGAGTTGCTCAAAGAAGGAGTTGGTGCTGACAAGTTGTGCAGCTTCACTAAACAAAATCCTGTACCCTCAAACTTGCTCAAGGGAATCGACTCTGCAGCTAGTGAGGCAGACACTCCTAGCTCTTCGAATTTACCTACTTCATGTGATCTAGATTCTCAACCTAAGCTAGAGACTGATACAATGCCCTCTTCATCTGCAACTAATAAGAATTCTTTATTCAAACTTGGTGATAAAGTAAAATTCACTGGTTCATCAACTGGTGGGTTATATTCAGCATCATCTTCCAGAGGTCCACCTAATGGAAGCCGTGGGAAAGTTGTCTTACTTTTTGATGACAATCCTTTGTCAAAAGTTGGCGTTAGGTTTGATAAGCTTGTTCCTGATGGAGTTGATCTTGGTGGACTATGTGAGGCAGGCTATGGATATTTCTGTAGTGTCACTGACCTCCGTATAGAAAATAGTGGTGTGGAAGAATTAGACAAGTTGCTAATCAACACGTTGTTTGAGGTTATATACAGTGAGAGCAGGAGTGGACCCTTTATATTGTTCATGAAAGATTCTGAGAAATCTGTTGTAGGGAACGGGGACTGTTATTCTACATTTAAAAACAAACTTGAAAAGCTTCCTGCCAATGTGGTGGTTATAGGTTCCCACACTCACACTGACAATCGGAAAGAGAAGTCACATCCTGGTGGTTTGCTTTTTACAAAGTTTGGCAGCAATCAAACTGCTCTTCTTGATTTAGCTTTCCCGGATAATTTTGGAAGACTGCATGATAGGGGCAAGGAAATACCCAAGGCTACAAAACTTCTAACTAAACTTTTCCCCAATAAAGTAACCATTCACATGCCACAGGATGAGGCACTTTTAGTGTCATGGAAAAAACAATTAGATCGGGATGTTGAAACCCTCAAGTTGAAAGCAAACCTATATAACTTGCGTATGGTTTTGGCTCGCTATGGGATTGAATGTGAAGGACTTGAAACTTTGTGCATTAAGGATCATACCCTGACAAATGAGAGTGCAGAGAAGATTGTTGGATGGGCTTTAAGCCATCACTTGATGCAAAATCCTGGAGCTGATTCTGATGCTAGGGTTATCCTGTCTTGTGAAAGCATCCAGTATGGAATTGGAATCCTACAGGCTATTCAGAATGAATCTAAGAGCTTGAAGAAGTCTCTGAAGGATGTTGTGACAGAAAATGAGTTTGAGAAGCGGCTCCTAACTGACGTAATCCCTCCCAATGACATTGGTGTTACTTTTGATGACATTGGAGCTCTTGAAAATGTGAAAGATACCCTAAAGGAATTGGTCATGCTCCCGTTGCAGAGGCCTGAACTATTCTGCAAGGGACAACTCACAAAGCCTTGCAAGGGTATCCTATTATTTGGTCCCCCTGGAACTGGAAAGACCATGCTTGCTAAGGCTGTTGCGACTGAAGCCGGTGCAAACTTCATCAACATTTCTATGTCTAGTATCACATCAAAGTGGTTTGGTGAGGGGGAGAAATATGTGAAAGCAGTTTTTTCTCTTGCCAGTAAAATTGCTCCAAGTGTTGTCTTTGTTGATGAAGTTGACAGCATGCTTGGTCGAAGGGAGAATCCTGGTGAGCATGAGGCCATGCGAAAAATGAAAAATGAGTTCATGGTCAACTGGGATGGATTACGCACAAAAGATACAGAGAGAGTTCTTGTGCTTGCAGCAACAAACAGGCCTTATGATCTTGATGAGGCTGTCATTCGGAGGCTACCTCGTAGATTAATGGTGGACTTGCCTGATGCTCCAAATAGAGCAAAGATATTGAAAGTAATACTGGCAAAAGAGGACTTGTCCCCTGCTGTTGATTTTGATGCTATTGCAAATATGACTGATGGGTATTCTGGAAGTGACCTCAAGAATCTGTGTGTCACAGCTGCACACCGTCCAATCAAAGAGATCTTAGAAAGGGAGAAGAAGGAGCGTGCTTCAGCTTTAGCAGAAGGTAAGCCAGCACCGGCTTTAAGTGGCAGTGCTGACATTCGACCACTAAACATGGAAGACTTCAAATATGCTCATGAACGGGTTTGCGCTAGTGTCTCCTCTGAATCTGTAAATATGACCGAACTTCTGCAATGGAATGAACTCTATGGTGAAGGAGGCTCTAGAAGAAGGAAGGCTCTTAGCTATTTCATGTGA 3612 0.4424 MVSTRRSGSLSGNNTKRSSSSGDKPLSPKRQKVDNGGSSQKPTPATENSKQLCSSAPPADPGECGSTDATVVGDAVTAGQADAQPALALAPPIADGSSPTLAVDKTRSSISAWSIYQKQNPSFDSSTPWCKLLAQSGQNPNVPICTANFTIGSNKTCNFQVKDQIVSTTLCKIRHTQREGSTVAVLESTGSKGLVLVNGTPVKKNTSCMLNSGDEVTFGVLGNHAYIFQQLNNEVAMKGVEVQNGVGKLLHPERRAGDPSAVAGASILASLSTSLTPRWKTPSQTASKIQQSVDVPVNSDIQVGAEIMLDGPDVNPVLNTTSEKVPDVGTDDKSSPVDCDPEAGTEAGNVMEERNGTRDLQPASTSGMTLRCVVFKDDVNAAILNGREIEVSFDNFPYYLSENTKNVLIAASFIHLKHKEHAKYTSELTTINPRILLSGPAGSEIYQEMLAKALANYFGAKLLIFDSHSFLGGLSSKEAELLKEGVGADKLCSFTKQNPVPSNLLKGIDSAASEADTPSSSNLPTSCDLDSQPKLETDTMPSSSATNKNSLFKLGDKVKFTGSSTGGLYSASSSRGPPNGSRGKVVLLFDDNPLSKVGVRFDKLVPDGVDLGGLCEAGYGYFCSVTDLRIENSGVEELDKLLINTLFEVIYSESRSGPFILFMKDSEKSVVGNGDCYSTFKNKLEKLPANVVVIGSHTHTDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDNFGRLHDRGKEIPKATKLLTKLFPNKVTIHMPQDEALLVSWKKQLDRDVETLKLKANLYNLRMVLARYGIECEGLETLCIKDHTLTNESAEKIVGWALSHHLMQNPGADSDARVILSCESIQYGIGILQAIQNESKSLKKSLKDVVTENEFEKRLLTDVIPPNDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPYDLDEAVIRRLPRRLMVDLPDAPNRAKILKVILAKEDLSPAVDFDAIANMTDGYSGSDLKNLCVTAAHRPIKEILEREKKERASALAEGKPAPALSGSADIRPLNMEDFKYAHERVCASVSSESVNMTELLQWNELYGEGGSRRRKALSYFM* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02455 1203 SMART AAA_5 935 1072 IPR003593 GO:0016887
Pte2g02455 1203 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 897 1073 - -
Pte2g02455 1203 CDD RecA-like_ATAD1 902 1068 - -
Pte2g02455 1203 Gene3D - 128 237 - -
Pte2g02455 1203 Gene3D - 1071 1165 - -
Pte2g02455 1203 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 375 1202 - -
Pte2g02455 1203 MobiDBLite consensus disorder prediction 513 548 - -
Pte2g02455 1203 SUPERFAMILY SMAD/FHA domain 114 225 IPR008984 GO:0005515
Pte2g02455 1203 Pfam AAA+ lid domain 1093 1127 IPR041569 -
Pte2g02455 1203 Coils Coil 859 879 - -
Pte2g02455 1203 MobiDBLite consensus disorder prediction 1 68 - -
Pte2g02455 1203 Pfam FHA domain 150 219 IPR000253 GO:0005515
Pte2g02455 1203 Gene3D - 897 1178 IPR027417 -
Pte2g02455 1203 CDD FHA 131 229 - -
Pte2g02455 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 898 1178 IPR027417 -
Pte2g02455 1203 MobiDBLite consensus disorder prediction 1 55 - -
Pte2g02455 1203 MobiDBLite consensus disorder prediction 322 363 - -
Pte2g02455 1203 ProSitePatterns AAA-protein family signature. 1042 1061 IPR003960 GO:0005524|GO:0016887
Pte2g02455 1203 MobiDBLite consensus disorder prediction 511 548 - -
Pte2g02455 1203 Pfam ATPase family associated with various cellular activities (AAA) 939 1068 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02455 Pte-Chr2 43860000 43869013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02455 898 1150 Calmodulin-binding Proteins AT3G56690 38.462 5.07e-40 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02455 - - qsa:O6P43_022558 1868.97