Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02450 ATGGCGGCAGGGCGACAAGCTGTTCTCAGGAGAAGGGAGTTTGGCCATTATCACAATGGTTATTCTGGTGTTGAAGTACATTCGGCCCATAAAGACACTGGCAATCCTAGGAATGGGTGCGGCAATTCGTCAAAGGCATGGAATGTCGTTTCAATGCAAGATTGTTATGGAAGAAACGAGGAAAGGGAACCAGGTGAATTGTCATCTGAAAGTGGCCTGGAAAATGAATATGCCTCTGACTTACAGGTGAATGGTGATGATGGTGTTGAGGTTCAGTTTCCTCCTAAGAAGAGAAGGAAGTTTTCTCCAATTGTTCGGGATCGACAAGAAAAGGAAGTTAGGATTTCATCAAAGAACAGGATTGTGCCTCTTGCTAATTTGACATCTTCACAACATTCCCCGAGTTTCCGTGTTGAGGAAGCTGATGTTGGTCCCAAGTGTCTCAAGACAGCTGGGAGATGCTACGGGTTGGTTGCTGCTGTTCCTGCATCTGATGGTCATTGTGGACAATTGAAAGCAGAGTCTCTAAATGTTGATCAGGACCGAGGTTGCATCGGAGAAGATTTTGTGCGAACGCTTGATGTAATGATGTCACGGTGGGCTTCTGACGGTGATACTCCTCGAAGTGAATCAGATGATGAAGATATGCATGAGATGAGGAGCTCTAGCTTTGAGAGCGGGGAGTTTCGAGCTTTGAATAGGGCTTGCTCATCAGGCAGTGGTGGAGGAAGTACTTGTCAGAGACCTTCTAGTGATGGTGATAGAAGCCCAGATGGGTTACTTTTTAGTGATGATTCTGCGGATGATGATAACATTTGCAGTGAAGTTGAGGTTGCTGATTCTGATGACAACGGAAGGTCACCTCAGGTTCACCGAAAGATAAATATGCTTCATAGTTGTAGAAGTGTTTTCGAGTTTGAAAAGCTTAACAAAATAAATGAAGGTACATACGGTGTTGTTTACAAAGCCAAAGACAAGAAGACTGGTAATACTGTGGCTCTAAAAAAGGTAAAGATGGATGTAGATAATAGAGATGGTTTTCCTATGTCATCATTGAGGGAAATCAACATTCTTTTATCTCTCAATCATCCGTCCATTGTGGATGTTAAAGAAGTAGTCATGGATGGAACTGACACTGTTTTTTTGGTGATGGAGTACATGGAACATGATCTCAAGGGGCTAATGGAGATGATGAAGCAGCCATTTAGCATAGGAGAAGTTAAGTTTCTAATACTGCAACTGCTTAACGGAGTCAAATATCTGCATGATAATTGGGTGTTGCATAGGGACTTGAAAACATCAAATCTTCTTTTGAACAAAGAGGGGAAATTGAAAATATGTGATTTTGGGTTATCCCGCCAATATGGGAGTCCCATGAAGCCCTATACGCCTCTTGTGGTCACTCTATGGTATAGGGCGCCTGAGCTTTTGTTGAATACAAAGCAATACTCCACTGCCATTGACATGTGGTCAGTAGGATGTATATTGGCGGAATTAGTTTCTAAGGAACCACTGTTTAATGGCAAAACTGAAATTGATCAGCTGAACAAGATTTACAGAATCCTAGGCACACCTGATGAGAAGAGTTGGCCGGGGTTGTCCAAATTACCAGGTGTTAAAGGAAATTTTGCTAAGCAACATCATAATTCCTTGCGGATGAAATTTCCTGCCACATCTTTCACAGGGGCTCCTGCTCTTTCCGACTTGGGTCTGGATCTTCTGAAGAAACTTCTAACTTATGATCCAGATATGAGAATAACTGCAGAAGCTGCTCTCAACCATGGTTGGTTCCACGAGGCACCTCTTCCTGCATATGGTTTCCAACCTTTTCGGCAAGTCTAG 1842 0.4305 MAAGRQAVLRRREFGHYHNGYSGVEVHSAHKDTGNPRNGCGNSSKAWNVVSMQDCYGRNEEREPGELSSESGLENEYASDLQVNGDDGVEVQFPPKKRRKFSPIVRDRQEKEVRISSKNRIVPLANLTSSQHSPSFRVEEADVGPKCLKTAGRCYGLVAAVPASDGHCGQLKAESLNVDQDRGCIGEDFVRTLDVMMSRWASDGDTPRSESDDEDMHEMRSSSFESGEFRALNRACSSGSGGGSTCQRPSSDGDRSPDGLLFSDDSADDDNICSEVEVADSDDNGRSPQVHRKINMLHSCRSVFEFEKLNKINEGTYGVVYKAKDKKTGNTVALKKVKMDVDNRDGFPMSSLREINILLSLNHPSIVDVKEVVMDGTDTVFLVMEYMEHDLKGLMEMMKQPFSIGEVKFLILQLLNGVKYLHDNWVLHRDLKTSNLLLNKEGKLKICDFGLSRQYGSPMKPYTPLVVTLWYRAPELLLNTKQYSTAIDMWSVGCILAELVSKEPLFNGKTEIDQLNKIYRILGTPDEKSWPGLSKLPGVKGNFAKQHHNSLRMKFPATSFTGAPALSDLGLDLLKKLLTYDPDMRITAEAALNHGWFHEAPLPAYGFQPFRQV* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02450 613 FunFam cyclin-dependent kinase G-2 isoform X1 291 388 - -
Pte2g02450 613 CDD STKc_CDC2L1 300 597 IPR045267 GO:0004674|GO:0005524|GO:0006468
Pte2g02450 613 SUPERFAMILY Protein kinase-like (PK-like) 300 603 IPR011009 -
Pte2g02450 613 MobiDBLite consensus disorder prediction 237 252 - -
Pte2g02450 613 ProSiteProfiles Protein kinase domain profile. 306 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02450 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Pte2g02450 613 SMART serkin_6 306 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02450 613 Gene3D Phosphorylase Kinase; domain 1 289 388 - -
Pte2g02450 613 FunFam Cyclin-dependent kinase G-2 389 610 - -
Pte2g02450 613 MobiDBLite consensus disorder prediction 201 268 - -
Pte2g02450 613 PANTHER CELL DIVISION PROTEIN KINASE 305 603 - -
Pte2g02450 613 Gene3D Transferase(Phosphotransferase) domain 1 389 603 - -
Pte2g02450 613 MobiDBLite consensus disorder prediction 205 224 - -
Pte2g02450 613 MobiDBLite consensus disorder prediction 59 90 - -
Pte2g02450 613 Pfam Protein kinase domain 306 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02450 Pte-Chr2 43824297 43826555 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02450 305 597 Core Cell Cycle Gene Families AT3G48750 46.622 2.13e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Pte2g02450 Pkinase 1.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02450 K08818 - qsa:O6P43_022574 607.446