Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02442 ATGAGGGAGACTGAAAGAATGGCCCCTAGATTGAATTCACTCAAGGTTGAGTGTTACAGTGAGAACGATGAAAATGAAACCATTGGGGCTGATCTTCATCTTTCGGCTACGGTCAGATATGCCGGTCACCATGTCATTCCTATGATGGAGACCAATGATTCCGGTTTCATCTTCCCCTTTGTCAATGAAACCTTAACCAGAGATTACAAGAGGTTGAGGAGAAGTAATACATGTATTGCTGACCCGCAAAGGAATAGTGACATAAATCAATATTATGGCAGTGGAAGCAGCAATATCAGCCGCTGTAGCAGCACAGGCAGTTTGAATACTTGGCCGAAGCTTCATTTCCGAGATCATATTAAGAATTACACGGACAGATACTTAGCTGTTGAAGCTGTTGACGAAGCGACAGCTCCAATGGTTGAGGAAGGTGGAGGTGAAAGAGAAGGAGCCGATGGTGTGAAGCTTGTGCAACTTCTGATTGCTTGTGCCGAAGCCGTCGCTTGTCGTGACAAGACTCATGCTTCATTTTTGCTATCTGATCTCCGAGCAAATGCTTTGGTATATGGTTCCTCCTTCCAGCGAGTTGCTTCTTGTTTTGTCCAAGGTCTAGCTGACAGACTTGCAACAGTTCAACCCATTGGAGCTGTGGGAAGTGGTTCACCGATAATGAATATTATGGATGGTGCAACAGAGAAGATGCACGAGGCTTTGCGCCTGGTTTATGAAATTTGCCCATATATTCAGTTTGGTCACTTTGTGGCCAATCTATCAATATTGGAAGCCTTTGAGGGTGAGAGTTTTCTGCATGTGATTGATCTGGGGATGAGTCTCAGTTTATCACATGGTTACCAATGGCGGGGGTTGATACAGAGCCTTGCTAATCGTTCAGGTCAACCTCTTCACCGTCTTCGAATAACTGGCATTGGTCGTTGTGCCGAGAAATTGCAGATTATTGGAGATGAGCTCAGAACTTTTGCACAAGAATATGGAATATGTCTGGAGTTCTCCGTGGTGAAAAGAAGTTTGGATACCTTAATGCCTGAAGACATAAAAGTTTATGCAGGAGAAGTTCTTGTGGCGAACAGCATACTGCAGATGCATTGTGTGGTTAAAGAAAGTCGTGGAGCTCTGAATTCTGTCCTGCAAATGATCCACGGTCTCTCACCAAAGTTGTTAATTTTGGTTGAACAAGATGCCAGCCACAACGGTCCTTTCTTTCTGGGGAGATTCATGGAAGCACTGCATTATTACTCTGCAATTTTTGATTCCCTTGATGCTATATTGCCTAAATATGACACCAGGCGTGCAAAGATCGAGCAATTTTACTATGCTGAGGAGATAAAGAACATTGTAAGCTGTGAGGGATCAGCAAGGGTGGAGAGGCATGAGAGGGTGGACCAGTGGAGGAGGAGGATGAGTAGAGCTGGATTTCAGGCTGTTCCTATCAAGATGATGGCTCAGGCCAAACAATGGCTCAGCAAGAACAGTTCTTTCCAAGGTTATAACATAGTGGAAGAGAAAGGCTGTTTGGTGCTGGGCTGGAAATCAAAACCGATCATTGCAGCTTCTTGCTGGAAACGCTAG 1587 0.4474 MRETERMAPRLNSLKVECYSENDENETIGADLHLSATVRYAGHHVIPMMETNDSGFIFPFVNETLTRDYKRLRRSNTCIADPQRNSDINQYYGSGSSNISRCSSTGSLNTWPKLHFRDHIKNYTDRYLAVEAVDEATAPMVEEGGGEREGADGVKLVQLLIACAEAVACRDKTHASFLLSDLRANALVYGSSFQRVASCFVQGLADRLATVQPIGAVGSGSPIMNIMDGATEKMHEALRLVYEICPYIQFGHFVANLSILEAFEGESFLHVIDLGMSLSLSHGYQWRGLIQSLANRSGQPLHRLRITGIGRCAEKLQIIGDELRTFAQEYGICLEFSVVKRSLDTLMPEDIKVYAGEVLVANSILQMHCVVKESRGALNSVLQMIHGLSPKLLILVEQDASHNGPFFLGRFMEALHYYSAIFDSLDAILPKYDTRRAKIEQFYYAEEIKNIVSCEGSARVERHERVDQWRRRMSRAGFQAVPIKMMAQAKQWLSKNSSFQGYNIVEEKGCLVLGWKSKPIIAASCWKR* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02442 528 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 119 522 IPR005202 -
Pte2g02442 528 ProSiteProfiles GRAS family profile. 147 527 IPR005202 -
Pte2g02442 528 Pfam GRAS domain family 156 527 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02442 Pte-Chr2 43778415 43780239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02442 153 527 GRAS Transcription Factor Family AT1G66350 38.158 2.84e-77 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte2g02442 GRAS 7e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02442 - - pop:7463101 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00178 3 1660715 1660990 Pte2g02442 2 43778415 43780239 RCT
Pte2g02442 2 43778415 43780239 Pte2g02442 2 43778415 43780239 RCT