Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02406 ATGGAAATTTCTCCTGGCTCCTATTCTGATAGCTCTTCGGAGCTAGGAAACAGTCAAACGGGCGATGACAACTACAGCGAACAGCAAAGCCATCAATTCTATACGTTCAAGGACAATTTCTCAACCGGAATAAATTTCCGGACGATCTTACCTCTCCAGTCTTCGAAATCGCTTGCTCCATCTTCCAAGAATGGCGACGGTCGTGTGAGGGGTAGCGACTACGGCCGATGTGGGGTGAGAAATATTGGGGCGTCGTGTGACGAGGATACAATTTGTTCCTTAATTAACCAAAAAATGAGGGAGCGTACTGAAACCTTGATTAGCGTAGTGAAGGGAATCACCCGAAGAATGGCTCAGTTGGACACGATAACCAGTCATGTGGAGGATTCGATTGATAGCTTGAATGATTCTACTGAGTACTATCATGGAAGAACTCATGTCAAGCTCCAAGAAATGGAGAATATGATCAGAGAGATTCAAGGTGGCATTCTAGACTTGCGAGACAAGCGAGAGATAGCAGAAACTCAGCTTCGGCTTGCCAGGCTTCAAACTCTGCGGGACAAGAGCCCTCAAAAAGTGGCAGTTCAACTTGCTTCATCAAGCCCACTGCAAGATCAGCAGCCTGTTGTTCGCCCCCAACAGAGTCCCTACTTTACTTCTACCGTTTCTCCTAACCCGCCTCCTCAGAATATATTGCACTCACCAGCTTCAACAGCAGTTGATCTTTCATACCAATTGGAACTGAACCAATACCCTCCTATTGACCAGAGTCAACGGTTTACACCAGTACTGTTTCCTAATCCTGCTTATCAGTATTACATGATGCCTATATCTCAAGCATCGTTGGCACCTATTGCAACTGTGCATAATGCGTCTTTGAACCAGCGATTCTCATCATCAGCTCAGCTATCATCAGTAAACGTGTATTCAAGTAGCCATCCTCAAACTCATTCATCAAATCAGAATCCTCGGCAAATTTCTTTTGTGGATCCTGAAGTTAATGTCTCATCAATCTCTTCATCATCAAGCGTATATAGTGCATTCTTCCCTGACCAAGCTGCTTACAACCAGCCTCCCAACAATGCATTTTCGAATTTTTCATCAGATGATGCACGCCCACCTGGAAATTCTGGACTTGCAAGTAATTTTACCGGTTCTGCTTCCAGGTCTGCTAATTCTGTAAGGGAAAGTTCACAGCATTTACCCAGCAGTTCATTCCCAAGGGATGATAGCAGCTATTCAAGTTTGGCAACTGGTAAAGAATTACCACGTGCACTGCCCATGGCAGTAAGCGTCGATGCTCCCACGGGCACAGAGGGGAATGAAAGTAGCTTGGGAATGGATGATGTTGTTGATAAGGTTGTAGCAATGGGATTCCGTAGGGACATCGTGAGAGCAACAGTGCGGAAACTGACCGAGGATGGGGGATCAGTTGATCCAAATACGGTGCTGGATATGCTCATGAATGATAGCAGGCAATAA 1482 0.4555 MEISPGSYSDSSSELGNSQTGDDNYSEQQSHQFYTFKDNFSTGINFRTILPLQSSKSLAPSSKNGDGRVRGSDYGRCGVRNIGASCDEDTICSLINQKMRERTETLISVVKGITRRMAQLDTITSHVEDSIDSLNDSTEYYHGRTHVKLQEMENMIREIQGGILDLRDKREIAETQLRLARLQTLRDKSPQKVAVQLASSSPLQDQQPVVRPQQSPYFTSTVSPNPPPQNILHSPASTAVDLSYQLELNQYPPIDQSQRFTPVLFPNPAYQYYMMPISQASLAPIATVHNASLNQRFSSSAQLSSVNVYSSSHPQTHSSNQNPRQISFVDPEVNVSSISSSSSVYSAFFPDQAAYNQPPNNAFSNFSSDDARPPGNSGLASNFTGSASRSANSVRESSQHLPSSSFPRDDSSYSSLATGKELPRALPMAVSVDAPTGTEGNESSLGMDDVVDKVVAMGFRRDIVRATVRKLTEDGGSVDPNTVLDMLMNDSRQ* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02406 493 Coils Coil 149 183 - -
Pte2g02406 493 Pfam UBA-like domain (DUF1421) 448 491 IPR010820 -
Pte2g02406 493 MobiDBLite consensus disorder prediction 359 418 - -
Pte2g02406 493 MobiDBLite consensus disorder prediction 1 28 - -
Pte2g02406 493 MobiDBLite consensus disorder prediction 359 420 - -
Pte2g02406 493 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 20 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02406 Pte-Chr2 43573019 43575981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02406 88 183 Trihelix Transcription Factor Family AT5G14540 38.542 8.59e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02406 - - vri:117904708 225.713