LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte2g02381	ATGAAGGAAAACAGTGATGGGTTTGTGAGGGCGGATCAGATTGATCTGAAAACGATTGATGACCAGCTTGAGAGGCATCTGAATAGGGTATTGACTATAGAGAAGAGCAAGAAGAAAGAGGAAGATGCTGGCAGTCATGAGAATACGCCGACGGCGGAGACCGCTCTTTCAGCCAGAAAAGGTGTCTCTTTCTTCAAGAAAAAGAGGCAGGACTGGGAGATTGACCCGTCCAAGCTCATAATCAAATCTGTTATTGCTCGTGGCACTTTTGGCACTGTCCACCGGGGTGTCTACGATGGTCAAGATGTCGCCGTCAAATTGCTTGACTGGGGTGAAGAAGGCCACAGAACAGAAGCTGAAATTAATTCATTAAGGTCTGCTTTTGGACAAGAAGTTGCTGTATGGCACAAACTTGATCATCCTAATGTTACTAAGGTCACTTTCATTTCTGCAAAAAAATTCAGGAGAATTTTTTCTTTTGCTGCTACATCATGCAACTTACTTTTCTTCATACGAACTCTACAGTTTATTGGGGCTACAATGGGGTCTTCAGAACTACAAGTGCAAACTGAAACTGGCCTGTTAAGCTTGCCAAACCAGTTCTGCTGTGTTGTTGTAGAATACCTTCCTGGTGGTGCTTTAAAATCTTTTCTCATAAAAAACAGAAGGAGAAAGTTAGCATTTAAAGTTGTCATTCAGCTTGCACTTGATCTTGCAAGAGGATTAAGTTATCTCCACGCTCAGAAGATTGTTCATAGAGATGTGAAGACAGAGAACATGCTGTTGGACAAGACGCGCACAGTTAAAATTGCTGATTTTGGGGTTGCTCGTGTTGAGGCATCCAATCCTAATGACATGACAGGAGAGACTGGTACACTTGGTTACATGGCCCCTGAGGTTTTAAATGGCAACCCGTACAACCGGAAATGTGATGTGTATAGTTTTGGCATTTGTTTATGGGAGATATATTGCTGTGACATGCCATATCCAGACCTTAGTTTCTCTGAAGTAACGACAGCTGTTGTTCGTCAGAACCTGAGGCCAGAAATACCAAGATGTTGCCCAAATTCTCTTGCAAATGTCATGAAGAGATGTTGGGATGCAAATCCTGATAAGCGACCTGAGATGGATGAGGTAGTTTCAATGTTGGAGGCTATTGACTCTTCAAAAGGTGGAGGAATGATTCCTGTTGATCAACAGCAAGGTTGTTTTTGCTTTCGCAAAAAACGAGGGCCATGA	1239	0.4286	MKENSDGFVRADQIDLKTIDDQLERHLNRVLTIEKSKKKEEDAGSHENTPTAETALSARKGVSFFKKKRQDWEIDPSKLIIKSVIARGTFGTVHRGVYDGQDVAVKLLDWGEEGHRTEAEINSLRSAFGQEVAVWHKLDHPNVTKVTFISAKKFRRIFSFAATSCNLLFFIRTLQFIGATMGSSELQVQTETGLLSLPNQFCCVVVEYLPGGALKSFLIKNRRRKLAFKVVIQLALDLARGLSYLHAQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTTAVVRQNLRPEIPRCCPNSLANVMKRCWDANPDKRPEMDEVVSMLEAIDSSKGGGMIPVDQQQGCFCFRKKRGP*	413

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte2g02381	412	Gene3D	Transferase(Phosphotransferase) domain 1	186	390	-	-
	Pte2g02381	412	ProSiteProfiles	Protein kinase domain profile.	79	386	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte2g02381	412	SMART	serkin_6	79	386	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte2g02381	412	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	59	387	-	-
	Pte2g02381	412	Gene3D	Phosphorylase Kinase; domain 1	61	158	-	-
	Pte2g02381	412	MobiDBLite	consensus disorder prediction	34	53	-	-
	Pte2g02381	412	FunFam	Serine/threonine-protein kinase HT1	209	394	-	-
	Pte2g02381	412	SUPERFAMILY	Protein kinase-like (PK-like)	62	383	IPR011009	-
	Pte2g02381	412	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	250	262	IPR008271	GO:0004672\|GO:0006468
	Pte2g02381	412	Pfam	Protein tyrosine and serine/threonine kinase	199	383	IPR001245	GO:0004672\|GO:0006468
	Pte2g02381	412	PRINTS	Tyrosine kinase catalytic domain signature	310	332	IPR001245	GO:0004672\|GO:0006468
	Pte2g02381	412	PRINTS	Tyrosine kinase catalytic domain signature	354	376	IPR001245	GO:0004672\|GO:0006468
	Pte2g02381	412	PRINTS	Tyrosine kinase catalytic domain signature	244	262	IPR001245	GO:0004672\|GO:0006468
	Pte2g02381	412	PRINTS	Tyrosine kinase catalytic domain signature	206	219	IPR001245	GO:0004672\|GO:0006468
	Pte2g02381	412	CDD	STKc_MAP3K-like	85	383	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte2g02381	Pte-Chr2	43339289	43342478	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte2g02381	1	344	MAP Kinase Kinase Kinase	AT5G50000	74.063	0.0	525

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Pte2g02381		PK_Tyr_Ser-Thr	7.9e-54	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte2g02381	-		-	qsa:O6P43_022726	661.759