Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02379 ATGAGGCATCGCCAACTTCCAGAAGAATTACAAGAAAAAGTGCGTCGGTTTGTTCAATATAAATGGACTGCAACAAGAGGTGTAGATGAGCAAGCCATTTTGAGTGAATTGCCTTTGGATTTGAGACGTCAAATACAAAGACATCTCTGTCTGGCCCTTGTTCGACGTGTTCCTTTCTTTTCACAAATGGATGATCAACTCTTAGATGCCATATGTGAACGCCTTGTCTCATCCTTGAATACAAAAGACACGTACATTGTCAGGGAAGGTGATCCTGTGAATGAAATGCTTTTCATCATCAGAGGACAACTAGAGAGCTCTACAACAGATGGGGGGAGGTCTGGATTTTTCAATTCTATTATCCTCAAACAAGGGGACTTCTGTGGCGAAGAGTTGTTGACATGGGCTCTGATGCCTAGCTCTGATAGTTTTCCGTCTTCCACACGAACAGTTAAGTGCCTCACTGAAGTTGAAGCGTTTGCTCTCTGCGCTGATGATCTAAAATTCGTCGCTACCCAATTCAAGCGACTTCATAGCAAGAAACTACAGCATGGTTTCAGGTATTATTCTCACCAATGGAGGACATGGGGAGCTTGCTTTATACAAGCAGCGTGGAGACGATATTACAGGAGAAAGATGGCCCTTGAGTTAGTAGAGAGAGAGAGCTTATATTACGGCAATGTTCTTGATCCTGATGATACGAGCGGTGATGGATCAACCATAGATAATGAGAACTGCAAACAGGGTCTTGGAGTTACCGTACTGGCTTCAAGATTTGCTGCAAACACTAGAAGAGGGACTGCTCGTAAAGTTGCATTACTAAATGCAGAGGCCGCTAGCTTGAAGATGCCAAAATTGTTTAAGCCAGAGGAACCAGATTTCTCAGCAGACGAAGAAGATCATTAA 906 0.4338 MRHRQLPEELQEKVRRFVQYKWTATRGVDEQAILSELPLDLRRQIQRHLCLALVRRVPFFSQMDDQLLDAICERLVSSLNTKDTYIVREGDPVNEMLFIIRGQLESSTTDGGRSGFFNSIILKQGDFCGEELLTWALMPSSDSFPSSTRTVKCLTEVEAFALCADDLKFVATQFKRLHSKKLQHGFRYYSHQWRTWGACFIQAAWRRYYRRKMALELVERESLYYGNVLDPDDTSGDGSTIDNENCKQGLGVTVLASRFAANTRRGTARKVALLNAEAASLKMPKLFKPEEPDFSADEEDH* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02379 301 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 294 - -
Pte2g02379 301 SUPERFAMILY cAMP-binding domain-like 1 180 IPR018490 -
Pte2g02379 301 ProSiteProfiles cAMP/cGMP binding motif profile. 59 133 IPR000595 -
Pte2g02379 301 SMART cnmp_10 59 189 IPR000595 -
Pte2g02379 301 CDD CAP_ED 59 189 IPR000595 -
Pte2g02379 301 FunFam Cyclic nucleotide-gated ion channel 1 57 174 - -
Pte2g02379 301 Gene3D Jelly Rolls 57 176 IPR014710 -
Pte2g02379 301 Gene3D Helix hairpin bin 1 49 - -
Pte2g02379 301 Pfam Cyclic nucleotide-binding domain 82 168 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02379 Pte-Chr2 43317975 43319066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02379 1 300 Ion Channels AT5G14870 67.593 1.48e-148 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02379 K05391 - csv:101209760 463.766