Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02354 ATGTCCGGCATGTGCAACGCAGCTGACTCTGCTGTCTGCGGCGATGGTGCCGGCGCCGGAGAGTTCATGCTCTTTGGGGTTAGATTCGTGGTTGACTCAATGAGAAAAAGCGTTAGTATGAATAATCTTTCTCAGTATGAGCATCCACAAGATGCGTCTAATAATAGCGATCGCAAGGAAGATACTGTTGCTGCCGGCTACGCATCCGCCGATGATGCCCTGACTCGTAATTCCGACAGGAATCGAGAGCGTAAACGAGGAGTTCCATGGACAGAGGAGGAGCATAAGCTTTTCTTGCTTGGCTTACAGAAAGTCGGGAAAGGAGATTGGAGAGGAATCTCACGGAACTTTGTCAAGACGAGGACGCCTACCCAGGTGGCAAGCCATGCTCAGAAATACTTTCTCCGCCGCAGCAACCTCAACCGCCGCCGCCGCCGCCGCTCAAGTCTGTTTGATATCACAACTGATTCGGTTACTCCTATGCCAATGGAGAAAGAACAGGGGCAACATGAAGATAGTCTCTCTCAGTTGCATCAGTTGCATACTCTCCATGCTAAAACTACCAACATGAGTGGATTTCCATTCATGCCAACTCTTCCAGTGGGTGCTGATATCCCTGACTTGATTGAGAATTCAGCGGAAAATCTTACATTGGGTAAAGGAAATCTGGGTCAGAATGAATTAATTAAGTTGGCTAGACCATTTCCAATTTCCCTAGATGCCAAGGCTTCCATGGTACAATGTGATAACATTAATTCGAATCCAGCAATTGATCCAGCATCACTGTCCCTCAAATTATCTCTGCAATCCGAGGCAAGAGCCACCCCTTCAAGGCATTCTGCATTCCAGGCAATGCCCTGCTTCAATAATGGAGATACCATCATTTCCGTTGCATGA 897 0.4783 MSGMCNAADSAVCGDGAGAGEFMLFGVRFVVDSMRKSVSMNNLSQYEHPQDASNNSDRKEDTVAAGYASADDALTRNSDRNRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRRSSLFDITTDSVTPMPMEKEQGQHEDSLSQLHQLHTLHAKTTNMSGFPFMPTLPVGADIPDLIENSAENLTLGKGNLGQNELIKLARPFPISLDAKASMVQCDNINSNPAIDPASLSLKLSLQSEARATPSRHSAFQAMPCFNNGDTIISVA* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02354 298 SUPERFAMILY Homeodomain-like 84 139 IPR009057 -
Pte2g02354 298 SMART sant 86 136 IPR001005 -
Pte2g02354 298 CDD SANT 89 134 IPR001005 -
Pte2g02354 298 ProSiteProfiles Myb-like domain profile. 82 134 IPR001005 -
Pte2g02354 298 FunFam transcription factor MYB1R1 88 139 - -
Pte2g02354 298 MobiDBLite consensus disorder prediction 44 88 - -
Pte2g02354 298 Pfam Myb-like DNA-binding domain 89 134 IPR001005 -
Pte2g02354 298 NCBIfam myb-like DNA-binding domain, SHAQKYF class 85 136 IPR006447 GO:0003677
Pte2g02354 298 Gene3D - 88 140 - -
Pte2g02354 298 ProSiteProfiles SANT domain profile. 85 138 IPR017884 -
Pte2g02354 298 PANTHER TRANSCRIPTION FACTOR KUA1 16 223 - -
Pte2g02354 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 138 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02354 Pte-Chr2 43146073 43147709 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte2g02354 Myb_DNA-binding 2.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02354 - - qsa:O6P43_030925 352.829