Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02336 ATGGGAAATTGTAACGCTTGTGTGAGAGTAGAAAAGACCAAACCAGAAAAGAACACCAACCACACAAACCAGAATAAGCCTAAGAAGAACAAGGAAAGAAGATCTAACCCGTATTCGGAGGATCCAATCAGGTCACCGGTTCCGATCCGGGTGCTGAAAGATGTCATTCCACTGAGTCACCGAACTCGAATCGGCGACAAGTACATACTGGGTCGTGAGAGGTTTTCGGAGATTGTTGGGAGTCCATATTATATGGCCCCTGAGGTGCTGAAAAGAAATTATGGTCCTGAGGTTGACATATGGAGCGCCGGAGTGATTCTTTATATTTTGTTATGCGGTGTTCCTCCATTTTGGGCTGAAACTGAACAAGGTGTCGCCCTTGCAATTTTGAGGGGGGTGATTGATTTTAAGAGGGAACCTTGGCCACAGATTTCGGAGAGTGCTAAAAGCCTTGTACGGCAGATGTTGGAGCAAGATCCTAAAAAGCGCTTGACTGCCGAACAGGTTCTAGAACATCCCTGGTTACAGAATGCAAAGAAAGCTTCTAATGTTCCATTGGGAGATATTGTAAGGTCAAGGCTAAAGCAGTTCTCTGTTATGAATAGATTCAAAAAGAAAGCACTTCGTGTTATTGCTGATCATCTATCAGTTGAAGAAGTGGAAATAATCAGGGAGATGTTTGCATTGATGGATACTGATAGAGATGGCAAGGTTACGTATGAGGAACTGAAGCTTGGCCTTCGGAAAGTTGGTTCTCAATTGGCTGAACCTGAAATAAAGATGCTAATGGAAGTGGCTGATGTCGATGGGAATGGTGTACTGGACTATGGAGAATTTGTGGCTGTGACTATTCACTTGCAAAGGATGGAAAATGATGAGCATTTTCGCAAAGCATTCATGTTTTTTGACAAAGATGGGAGTGGGTATATTGAATTAGGTGAGTTACGGGAAGCACTGGCAGATGAGTTTGGTGAAACTGAGTCTGATGTGCTGAATGACATCATGCGCGAGGTTGATACCGACAAGGATGGCCGCATCAGCTATGATGAGTTTGTAGCTATGATGAAAACTGGAACTGACTGGAGAAAAGCATCTCGGCAGTATTCAAGGGAAAGATTCAAGAGTTTGAGCCTAAACCTTATGAAGGATGGTTCGTTGCAACTTCATGATGGGCTCACTGGTCAAGCAGTTGTGGTTTGA 1200 0.4383 MGNCNACVRVEKTKPEKNTNHTNQNKPKKNKERRSNPYSEDPIRSPVPIRVLKDVIPLSHRTRIGDKYILGRERFSEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVALAILRGVIDFKREPWPQISESAKSLVRQMLEQDPKKRLTAEQVLEHPWLQNAKKASNVPLGDIVRSRLKQFSVMNRFKKKALRVIADHLSVEEVEIIREMFALMDTDRDGKVTYEELKLGLRKVGSQLAEPEIKMLMEVADVDGNGVLDYGEFVAVTIHLQRMENDEHFRKAFMFFDKDGSGYIELGELREALADEFGETESDVLNDIMREVDTDKDGRISYDEFVAMMKTGTDWRKASRQYSRERFKSLSLNLMKDGSLQLHDGLTGQAVVV* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02336 399 FunFam Calcium-dependent protein kinase 7 184 359 - -
Pte2g02336 399 Gene3D Transferase(Phosphotransferase) domain 1 53 182 - -
Pte2g02336 399 ProSitePatterns EF-hand calcium-binding domain. 267 279 IPR018247 -
Pte2g02336 399 SMART serkin_6 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02336 399 MobiDBLite consensus disorder prediction 10 39 - -
Pte2g02336 399 Gene3D - 183 359 - -
Pte2g02336 399 SUPERFAMILY Protein kinase-like (PK-like) 73 198 IPR011009 -
Pte2g02336 399 SMART efh_1 330 358 IPR002048 GO:0005509
Pte2g02336 399 SMART efh_1 222 250 IPR002048 GO:0005509
Pte2g02336 399 SMART efh_1 294 322 IPR002048 GO:0005509
Pte2g02336 399 SMART efh_1 258 286 IPR002048 GO:0005509
Pte2g02336 399 Pfam Protein kinase domain 73 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02336 399 MobiDBLite consensus disorder prediction 1 44 - -
Pte2g02336 399 SUPERFAMILY EF-hand 203 382 IPR011992 -
Pte2g02336 399 ProSitePatterns EF-hand calcium-binding domain. 231 243 IPR018247 -
Pte2g02336 399 ProSitePatterns EF-hand calcium-binding domain. 339 351 IPR018247 -
Pte2g02336 399 ProSiteProfiles EF-hand calcium-binding domain profile. 326 361 IPR002048 GO:0005509
Pte2g02336 399 FunFam Calcium-dependent protein kinase SK5 85 180 - -
Pte2g02336 399 Pfam EF-hand domain pair 223 282 IPR002048 GO:0005509
Pte2g02336 399 Pfam EF-hand domain pair 293 356 IPR002048 GO:0005509
Pte2g02336 399 ProSiteProfiles Protein kinase domain profile. 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02336 399 ProSiteProfiles EF-hand calcium-binding domain profile. 290 325 IPR002048 GO:0005509
Pte2g02336 399 ProSiteProfiles EF-hand calcium-binding domain profile. 218 253 IPR002048 GO:0005509
Pte2g02336 399 PANTHER SERINE/THREONINE-PROTEIN KINASE 73 351 - -
Pte2g02336 399 ProSitePatterns EF-hand calcium-binding domain. 303 315 IPR018247 -
Pte2g02336 399 ProSiteProfiles EF-hand calcium-binding domain profile. 254 289 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02336 Pte-Chr2 42986688 42990045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02336 1 73 EF-hand Containing Proteins AT1G74740 44.595 3.14e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte2g02336 Pkinase 7.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02336 K13412 - csin:114267664 612.453