Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02333 ATGGAAGTTTATGTGTGGTTCTTCTTGGCCATTTTTTCACTTGCAGTCTGCCCTTCTTTCCATGCTCTATCTCAAGATGGTCTCACTTTGTTGGAAATAAAGACTGTTCTGAATGACACAAACAATGTCCTCAGTAACTGGAAAGAAACGGATGCTTCACCTTGTGGTTGGACTGGTGTGTCTTGTCATCGGGAAGATCTACGAGTCCTTTCAATAAATCTGCCTTACATGCAACTTGGAGGGATTATATCTCCCAGTATCGGAAAACTTACTAGGCTGCAGAGGCTGGCACTCCATCAGAACAATTTACGCGGTACTATTCCTATTGAAATAACAAATTGTACTGAACTCAGGGCCCTGTATCTGAGGGCCAATTATCTGCAAGGAGGCATACCTTTTGATATCGGAAACCTCTCTTACCTCACCATACTAGATTTATCAAGCAATTCACTGAAGGGTGCCATACCATCTTCGATTGGTCGTCTTGCACGTTTGCGCCATTTGAACCTGTCCACAAACTTCTTTTCTGGCGAAATTCCTGATATCGGTGTACTTAGCACCTTTGGGAACAACTCGTTTATTGGTAATTTAGATCTTTGTGGTCAGCAAATTCACAAGCCATGTCGTACATCACTCGGTTTTCCTGTGGTGCTACCACATGCTGAAAGTGATGAAGCAACAGTCCCCACCAAAAGATCATCACGTTACTTGAAGGGGGTGCTGATAGGTGCCATGTCCACAATGGCCTTTGCACTTGTAGTTATCCTTTCATTTCTCTGGATATGTATGCTATCCAAGAAGGAAAGAACTGCAAGGAAGTATACTGAAGTAAAAAATCAAGTAATTCCTGAAGCAAGTACAAAGCTTATCACCTTCCATGGTGATCTACCATATCCCTCATCAGAGATCATTGAGAAGTTGGAAGCTCTGGATGAAGAAGATATTGTAGGGTCAGGAGGATTTGGTACTGTGTATCGAATGGTCATGAATGACTGTGGTACATTTGCTGTGAAAAGAATTGACAGAAGTCGAGAAGGATCGGATCAAGCATTTGAAAGAGAGATAGAGATCTTAGGTAGTATCAAGCATATAAATTTGGTTAACCTGAGAGGATATTGCAGGCTACCTGCTTCAAAGCTTCTCATCTATGACTATCTGGCTATGGGAAGCTTAGACGATTTTTTGCATGGAGATACTGAAGAACTACCATTAAACTGGAGTGCTCGACTGAAAATTGCCCTTGGTTCTGCGAGGGGGTTGGCATATTTGCACCATGACTGCTCCCCAAAGATTGTGCATCGTGACATAAAATCCAGCAACATTCTTCTTGATGAAAACTTGGAACCCCATGTGTCTGACTTTGGTCTTGCAAAGCTTTTGGTTGATGAAGATGCCCATGTTACTACAGTGGTTGCTGGCACATTTGGCTATTTGGCACCAGATCCTTCCTTTGTGAAGAGAGGTTTAAATGTAGTTGGTTGGATGAACACTCTGTTAAGAGAGAACCGTTTAGAAGATGTGGTCGACACGAAGTGCACTGACGTAGAGGTGGAAACTGTGGAAGCTATTCTGGACATAGCTGCAAGGTGCACTGATGGAAACCCAGATGATCGTCCATCCATGAACCAGGTGCTGCAGTTGCTTGATCAGGAGGTTGCGTCACCTTGCCCAAGTGATTTGTACGAATCACATTCAGATCAATATTGA 1707 0.4306 MEVYVWFFLAIFSLAVCPSFHALSQDGLTLLEIKTVLNDTNNVLSNWKETDASPCGWTGVSCHREDLRVLSINLPYMQLGGIISPSIGKLTRLQRLALHQNNLRGTIPIEITNCTELRALYLRANYLQGGIPFDIGNLSYLTILDLSSNSLKGAIPSSIGRLARLRHLNLSTNFFSGEIPDIGVLSTFGNNSFIGNLDLCGQQIHKPCRTSLGFPVVLPHAESDEATVPTKRSSRYLKGVLIGAMSTMAFALVVILSFLWICMLSKKERTARKYTEVKNQVIPEASTKLITFHGDLPYPSSEIIEKLEALDEEDIVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQAFEREIEILGSIKHINLVNLRGYCRLPASKLLIYDYLAMGSLDDFLHGDTEELPLNWSARLKIALGSARGLAYLHHDCSPKIVHRDIKSSNILLDENLEPHVSDFGLAKLLVDEDAHVTTVVAGTFGYLAPDPSFVKRGLNVVGWMNTLLRENRLEDVVDTKCTDVEVETVEAILDIAARCTDGNPDDRPSMNQVLQLLDQEVASPCPSDLYESHSDQY* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02333 568 Gene3D Phosphorylase Kinase; domain 1 269 385 - -
Pte2g02333 568 ProSiteProfiles Protein kinase domain profile. 310 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02333 568 SMART serkin_6 310 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02333 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Pte2g02333 568 Pfam Protein kinase domain 312 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02333 568 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 193 550 - -
Pte2g02333 568 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Pte2g02333 568 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 185 - -
Pte2g02333 568 SUPERFAMILY L domain-like 24 207 - -
Pte2g02333 568 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Pte2g02333 568 Gene3D Transferase(Phosphotransferase) domain 1 386 481 - -
Pte2g02333 568 Gene3D Transferase(Phosphotransferase) domain 1 482 555 - -
Pte2g02333 568 SUPERFAMILY Protein kinase-like (PK-like) 294 548 IPR011009 -
Pte2g02333 568 Gene3D Ribonuclease Inhibitor 23 210 IPR032675 -
Pte2g02333 568 FunFam Protein kinase superfamily protein 386 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02333 Pte-Chr2 42959667 42964728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02333 6 557 Receptor kinase-like Gene Family AT2G35620 47.432 5.25e-178 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Pte2g02333 Pkinase 5.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02333 - - tcc:18604589 939.873