Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02316 ATGATCTTCATTCTCATGTTTGCTCTCACAGTGGCATATGACCCCTTGGATCCAACTGGAAACGTTACAATAAAGTGGGATATTATGTCCTGGACGCCAGATGGTTACGTGGCAGTGGTGACAGTGTCAAACTTCCAAATGTATCGGCATATCACGAGCCCTGGGTGGAGACTAGGCTGGACGTGGGCTAAGAAGGAAGTGATTTGGTCTATGATGGGTGCACAGGCTACAGAACAAGGAGACTGTTCCAAATTCAAGATAACACTACCACACTGTTGTAAGAAGAACCCCACTCTCGTTGACTTACTTCCCAGTGCTCCTTACAACCAGCGGATTGCCAATTGTTGCAAAGGAGGTGTAATAGCAAGTTGGGGACAAGACCCTTCAGCCGCTGTCTCTGCCTTTCAACTCAGTGTTGGTCGCTCTGGGACTTCCAACAAAACTGTAAGATTGCCTAAGAATTTCACCTTGCTTGGTCCAGCTAGAGGCTACACTTGCAGCCAGGCGAAAGTTGTTCCTTCCTCAGTTTTTCTCTCTTCTGATGCTCGTCGAATAACTCAAGCAATGATGACATGGAATATCACCTGCAGTTACTCGCAATTGCTAGCTTATCAGAAACCAAACTGTTGCGTATCCCTGTCATCCTTCTACAGCCCCACGATCACCACCTGTCCAAGTTGTGCGTGCGGTTGCCAAAATAAAAACAATTGTGTGATGAATGACCCAGAGATTCAAAGTGTCGTGGATAAAAACAGAGAGACAGACATCAATTCTGCACCATTGCTGCAATGCACACAACATATGTGCCCAATTCGTGTGCATTGGCATGTGAAGCTTAATTACAAGCTATATTGGCGTGTGAAGATTTCAATAACCAATTTCAACTATGCAATGAATTATACCCAGTGGACGCTTGTTGTCAGGCATCCAAATCTAGACAATGTCACGCAAGTCTTTAGCTTTGCATACAAACCACTCCTTCCATATGAGTCCTTCAACGATACTGGCATGTTTTCTGGGTTAAAGTTTTACAATGATTTATTGATGGAAGCTGGAAAATATGGGAATGTACAGTCAGAGATGATTCTTTACAAGGATGAGAACAAATTCACATTTGACCAAGGTTGGGCATTCCCACGTCAAGTCTACTTCAATGGGGATGAGTGTATGATGCCCCCACCTGATTCATACCCAAGTGTTCCAAGCTCTGCCACTACATTTGCAGTCTCAACTTCCTTGGAATTCTCTTCCCTTGTGATTATCGCGTTTCTAGCTACTATTTAA 1284 0.4416 MIFILMFALTVAYDPLDPTGNVTIKWDIMSWTPDGYVAVVTVSNFQMYRHITSPGWRLGWTWAKKEVIWSMMGAQATEQGDCSKFKITLPHCCKKNPTLVDLLPSAPYNQRIANCCKGGVIASWGQDPSAAVSAFQLSVGRSGTSNKTVRLPKNFTLLGPARGYTCSQAKVVPSSVFLSSDARRITQAMMTWNITCSYSQLLAYQKPNCCVSLSSFYSPTITTCPSCACGCQNKNNCVMNDPEIQSVVDKNRETDINSAPLLQCTQHMCPIRVHWHVKLNYKLYWRVKISITNFNYAMNYTQWTLVVRHPNLDNVTQVFSFAYKPLLPYESFNDTGMFSGLKFYNDLLMEAGKYGNVQSEMILYKDENKFTFDQGWAFPRQVYFNGDECMMPPPDSYPSVPSSATTFAVSTSLEFSSLVIIAFLATI* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02316 427 PIRSF COBRA 1 427 IPR006918 GO:0010215|GO:0016020
Pte2g02316 427 PANTHER PROTEIN COBRA 2 413 IPR006918 GO:0010215|GO:0016020
Pte2g02316 427 Pfam COBRA-like protein 36 199 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02316 Pte-Chr2 42878530 42880943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02316 1 424 COBRA Gene Family AT3G02210 62.877 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02316 - - mnt:21390758 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02316 2 42878530 42880943 Pte2g02316 2 42878530 42880943 RCT