Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02312 ATGGCTGCAAAGTTACTGCATTCTTTAGCGGATGACAACCCAGATTTGCAAAACCAGATAGGATGCATGACAGGGATCTTTCAACTGTTTGATCATCAACATGTCCTCAAAGGACGCCGTATTAGCCATAAGAGGCTTCCCTCTGGTAATTATCATTCAGGTAATTCCCATTTCAATGACAGCAGCTTGGAGAGACACTCTAGTAGCGAAAATTATCTACAAGCCTCAGTGGATACCAACACGAACAAGGGCGTTAATGAGAATCAAAGGCTTTCTACAGAGTCATCAAGAACCTCTTCTTCATCTTCCTGTTCATCTTCTTTGTCTTCAATGGAATGCAACAGAGCTCAACCAGAGGGTTCCTTGGACCGAATCATATTTCCTGAGAATCCATCAAGAGATCCAGTTATGAACATATCGTTTGTGTCTTCACATTCAAGACGACAGTCACTTGATCTTAGAGATGTGGTGAAGGACTCTATGTATAGAGAGGCAAGAGGGATGTCAGTTAAAACAGTCAAAGAGCAAGCTGTCTGTGGAACAATGAAGCATAAAGATACCCCAAGGCCTTTGCAGCTGTCCAAGTCCGTCAGTGGCTCCTATGGAGCACATATAGATGGGAAGCCAAATCTGCCAGTTGATCTGAAGGAGTCTTTCAGAGTTCTCGCTAAGCTCAGAGATGCACCATGGTATGGTAATGAAGGAAGAGAACTTGCAAGATCATCTTATTATGTAAGGGATGGACAATGGCATTCACTTCCAAAAGATGCACCAAGGTTTTCTTATGATGGGAGAGATATAAGCCGTTTATCTTTTGAATCTCGAGATACCCTCAAATCCACTCCAAAGCTAAAAGAGCTCCCCAGACTTTCATTGGACAGCAAAGGAGGTTCAATGCGAACTTCCAGCTCCGATTCAAAGATATCTCAGCTCCCAAAGAACTCCCAAAGTGGTGGCAACTCAAATGATAAAATTTGTAATGTATCACAATGCAGTGGGGCTCAGAAGCGGCCTCCTGGTGTGGTAGCAAAGCTGATGGGCTTGGAAGCATTGCCAGACTCCTCCATGGCTGCAAATAATGATTCTATGGAGTATTCCTCAGTGGGAGCTACAGATTCATTCTCTAGATCACATAGGACAAATGATTTAAACATGTGGAGCAGAAATTCTAATCCATCAAAGTTCTCTATGAAAGATCCAATTTCTCCAAGGTGGAAGAATTCTAATTTGGTCATGAGACCAGTTTTAAGTTCAAGGTTTCCTATTGAACAAGCACCTTGGAAACAAAAGGATGTATATAGAGGGTCTCAGAGTGCAAGTCTCAGGACCAAAACACACCCAACTGGGACAGCTAATTCCTTTCCTTCTGTTTATAGTGAGATTGAGAAGAGACTAAAAGATAATGAGTTTAAACAATCTGGAAGGGATCTTAGCGCTCTTAAACAAATATTAGAAGCAATGCAAGCCAAAGGGCTCTTAGATACCTCAAAGGACGAACACGATTCAAACTTTGGCAGTGAGAAAGCTTATGAACGATGCAGAAGTTCTCATCAGAATCCAAAGTCAGTGAGGCCACCGAATTCAAAGAGCAACCAGAGTATCACTAGCACAGTTAGAGGCTCTGATACAACCAGGGCTTTGAACTCCCAAATTGTGATCATGAAAACAGCAAAACGTGTAGATAAACCTGGACATTCAGCTTCCTCTGTTATTTCGGTTGACCATCTTTCAGGTCCTAGTAAGATCCAAAGTGGCGGATATCAAGATAATAAGAAGGCTTCAGCTAACTCCCGGGCAACTAGAGATCAATCTTCTCAGAACAACCGCAGGGATACCGCTGCCGGCACCAATGACAAAAATCCAAGTATCAGGAAGTTAAGGGCCACACAGTTCCAATCGAAGTCGTCCCAACTTCCTAAAGGAAATAACCACGTTCCCGTTAAGAATTCAGGATCAGTCAGCCCAAGGCTGCAACGGAAAAAGCTTGACTTGGAGAAGCATTCTCGACCACCTACCCCTCCATCTGATTCAACTAAAGCCAGAAGGCTATCTGTTAAGCAGGCAACAGCATCAGCTTCACCAGGTAATAAGCGAAGACCCAAGTACCAGAACATGCAGCATAGTGATGACCAATTGAGTGAAATAAGTAGCGACTCTAGAAGTTTGAGCTGCCATGAAGAAGATACTTCTCTGCTTCCAGATTATAATGCGTTCTCTGGCTCAATTTTAGATGAAGAAATCACCAGCAATTTACAATCTTCCAAAATAAAGGGCAGTCAGAGTCCATCAATCGAAACTAAGTGCACGGTTTCTGACTCAACGCAAAAGAACTCAACTCAAAAGATGGACGAAGATGGCTCAGTTGCAGAACTTGCTACCATTACTCAAGAACAGCCTAGCCCTGTGTCTGTTCTTGATACATCAATATGTAGAGATGATGCGCCATCATCTACAAAGCAGATATCACATGCTCCTGAAGATGATGCCAATATTGAACTTAAAGATACTCACGAAGAAAGTCATTGGAACACTGAGGATAAGTTATCGTCTAACTGCGTAGGATCTGTTATGGCACTAGAGCTCAACCGGAAGAAGTTACAGAACGTAGAAAACCTTGTACAGAAGCTGAGACGGCTCAACTCCAGTCATGATGAAGCTAGGATAGACTACATTGCTTCGCTTTGTGAGAATACAAATCCTGACCGTAGATACATATCCGAAATACTGTTGGCTTCAGGTCTACTTCTCAGAGACCTGGGCTCCGAACTCATGACATTTCAACTCCACTCTTCTGGCCACCCCATTAACCCTGAATTATTCTTTGTTTTAGAGCAAACAAAAGCAAGTACTGTACTTCCAAAAGAAGAATGCACATCTGAGTTGTTTTCTAATTCAAAGTCAGACCCTGGAAAACACCACAGAAAACTTGTGTTTGACACTGTCAATGATATTCTTGGCGTCAAGTTATCATCATTGGCCCCATGTTTTGAGACATGGTTGAAGCCTATCAAACTTGCGCGGAAGACCTTTACTGCACAAAAGCTACTTAAAGAACTGTGTTCAGAGATGGAGAACATCCAAGCCAAGAAATCAGTATGTCCGCAGGGAGATGAGGATGATGCCATGAAAAGTGTTCTATGGGAAGATGTAATGCATCCGTCAGATAGTTGGACTGATTTCCATAATGAAATGCCTGGACTAGTACTGGATGTTGAGAGACTTGTTTTTAAGGATTTAGTCGATGAGATTGTCACTAGCGAGGCACCTTGTTTGCTGTTCGAACCAAGCAGACGCAGGCAGCTGTTTGCGCAGTAG 3315 0.4281 MAAKLLHSLADDNPDLQNQIGCMTGIFQLFDHQHVLKGRRISHKRLPSGNYHSGNSHFNDSSLERHSSSENYLQASVDTNTNKGVNENQRLSTESSRTSSSSSCSSSLSSMECNRAQPEGSLDRIIFPENPSRDPVMNISFVSSHSRRQSLDLRDVVKDSMYREARGMSVKTVKEQAVCGTMKHKDTPRPLQLSKSVSGSYGAHIDGKPNLPVDLKESFRVLAKLRDAPWYGNEGRELARSSYYVRDGQWHSLPKDAPRFSYDGRDISRLSFESRDTLKSTPKLKELPRLSLDSKGGSMRTSSSDSKISQLPKNSQSGGNSNDKICNVSQCSGAQKRPPGVVAKLMGLEALPDSSMAANNDSMEYSSVGATDSFSRSHRTNDLNMWSRNSNPSKFSMKDPISPRWKNSNLVMRPVLSSRFPIEQAPWKQKDVYRGSQSASLRTKTHPTGTANSFPSVYSEIEKRLKDNEFKQSGRDLSALKQILEAMQAKGLLDTSKDEHDSNFGSEKAYERCRSSHQNPKSVRPPNSKSNQSITSTVRGSDTTRALNSQIVIMKTAKRVDKPGHSASSVISVDHLSGPSKIQSGGYQDNKKASANSRATRDQSSQNNRRDTAAGTNDKNPSIRKLRATQFQSKSSQLPKGNNHVPVKNSGSVSPRLQRKKLDLEKHSRPPTPPSDSTKARRLSVKQATASASPGNKRRPKYQNMQHSDDQLSEISSDSRSLSCHEEDTSLLPDYNAFSGSILDEEITSNLQSSKIKGSQSPSIETKCTVSDSTQKNSTQKMDEDGSVAELATITQEQPSPVSVLDTSICRDDAPSSTKQISHAPEDDANIELKDTHEESHWNTEDKLSSNCVGSVMALELNRKKLQNVENLVQKLRRLNSSHDEARIDYIASLCENTNPDRRYISEILLASGLLLRDLGSELMTFQLHSSGHPINPELFFVLEQTKASTVLPKEECTSELFSNSKSDPGKHHRKLVFDTVNDILGVKLSSLAPCFETWLKPIKLARKTFTAQKLLKELCSEMENIQAKKSVCPQGDEDDAMKSVLWEDVMHPSDSWTDFHNEMPGLVLDVERLVFKDLVDEIVTSEAPCLLFEPSRRRQLFAQ* 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02312 1104 MobiDBLite consensus disorder prediction 673 719 - -
Pte2g02312 1104 MobiDBLite consensus disorder prediction 295 334 - -
Pte2g02312 1104 Pfam DUF761-associated sequence motif 328 355 IPR032795 -
Pte2g02312 1104 MobiDBLite consensus disorder prediction 431 454 - -
Pte2g02312 1104 MobiDBLite consensus disorder prediction 45 115 - -
Pte2g02312 1104 MobiDBLite consensus disorder prediction 48 115 - -
Pte2g02312 1104 MobiDBLite consensus disorder prediction 754 785 - -
Pte2g02312 1104 MobiDBLite consensus disorder prediction 558 727 - -
Pte2g02312 1104 Coils Coil 859 889 - -
Pte2g02312 1104 MobiDBLite consensus disorder prediction 519 543 - -
Pte2g02312 1104 MobiDBLite consensus disorder prediction 658 672 - -
Pte2g02312 1104 Pfam Domain of unknown function (DUF4378) 902 1082 IPR025486 -
Pte2g02312 1104 MobiDBLite consensus disorder prediction 570 656 - -
Pte2g02312 1104 MobiDBLite consensus disorder prediction 754 784 - -
Pte2g02312 1104 MobiDBLite consensus disorder prediction 494 543 - -
Pte2g02312 1104 PANTHER LONGIFOLIA PROTEIN 1 1102 IPR033334 GO:0051513
Pte2g02312 1104 MobiDBLite consensus disorder prediction 281 338 - -
Pte2g02312 1104 MobiDBLite consensus disorder prediction 494 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02312 Pte-Chr2 42848049 42854106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02312 151 1103 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 45.148 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02312 - - qsa:O6P43_022922 1228.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02312 2 42848049 42854106 Pte2g02312 2 42848049 42854106 RCT