Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02302 ATGGAGCTTCCTCAACCCCGTCCTTTTGGAACTGAAGGAAAAAAACCAACTCATGACTTTCTGTCATTGTATAGTCATCCAACTGCACCACAAGAACCAATACCACCTTGTCAAGACAATTATCTCAAGACCCATGATTTCTTACAACCGCTAGAACGAATGGGGAGGAAAAGCAACAGTAAGGAAGAAGCAATAGAGGGTATATCAGTGGTACAAAGGCCACCACCTCCGGCACCACCTCCTTCTGTCGAACACATTTTACCCGGAGGGATTGGGACTTATACTATAGGCCACATCTCAAATTTTAATCAAAGGGCTCTAAAGCCCGAGGGATCGATATTTTCAGTGGCTCAAACAAGTAAGGATCACGATTATGAGAATTCCATCTGCACTTACACTGGAAATGGTTTCACCTTGTTGGAAGAATCTGCAGCTAAGAAGGGAAAGACAGGGAAGGAGAATATGGCACAGAAATCCGGCGTACGAGGAACAAATTCTGGGCCGAAGGCGCCAAAATGGACGCCGCTCGAACGACCGTCACAGTCAACTTCCAATAATATCCTCACCCGCCACACCTCTCCGTCTACTTCTCAGACAATTGGGCAGAAGAGCCACAGCTTTATCGACATGATAAAATCGGCTAAGGATTTTATCCATGAAGAGGACGAAGACGATATAGAAGAATTCATCATTAAGACAGAACCCAAACCCAACCAAAAAGGTGAGTTGATTGTGACAATGGACAGCAAAAACAAACAACAAAAGCCAAACACGCCTCGATCGAAACATTCAGCAACCGAACAGCGTAGAAGGAGCAAAATCAACGACAGGCAAATACCATTTACCCTCAAAATTATGTTGAGACAGTTGATTCCTCACAGTGATCAAAAGAGAGACAAGGCATCGTTCTTACTGGAGGTTATCGAGTATATTCACTTCTTGCAAGAGAAAGTTCAAAAGTATGAAGGATCGTTCCGAGGGTGGAGCTCTGACGCTGAGGAAATGATGCCTCGGAAAAACAATCCAAAATCTGGAGACAGTGCCGATGACCAATTTGGCATTGTGAAAAATAGCTCAGGTTCAGAATTGTTTGCTGGGAATATTGATGCGAAAAATATCATTACATCTCTAGCATTACCTGGAAATGCACACAACCCAATGAAATCTGACATGAGCATTGCAACCACCTACGTAGGAAGTGATCAAAATCCTAGAACAATGAAGTACGATTCCAATTCTGTCAGCGAAAATCTGAAAGCAAAGGGTTTGACCATTGAAGACGGCACCATTAGCATCTCAAGTGTATATTCTCAAGGGTTGTTACGTACTCTAACGAAATCTCTGCAAGGTTCTGGAGTTGATTTGTCACAAGCAAGTCTCTCGGTGCAAATTGAGATCGGCAAACAAGGGAATATCAGACCTAAGTGTACAGCAGTTCAGTCGGAAGGCTCATGGCATTCCGGCTAG 1467 0.4369 MELPQPRPFGTEGKKPTHDFLSLYSHPTAPQEPIPPCQDNYLKTHDFLQPLERMGRKSNSKEEAIEGISVVQRPPPPAPPPSVEHILPGGIGTYTIGHISNFNQRALKPEGSIFSVAQTSKDHDYENSICTYTGNGFTLLEESAAKKGKTGKENMAQKSGVRGTNSGPKAPKWTPLERPSQSTSNNILTRHTSPSTSQTIGQKSHSFIDMIKSAKDFIHEEDEDDIEEFIIKTEPKPNQKGELIVTMDSKNKQQKPNTPRSKHSATEQRRRSKINDRQIPFTLKIMLRQLIPHSDQKRDKASFLLEVIEYIHFLQEKVQKYEGSFRGWSSDAEEMMPRKNNPKSGDSADDQFGIVKNSSGSELFAGNIDAKNIITSLALPGNAHNPMKSDMSIATTYVGSDQNPRTMKYDSNSVSENLKAKGLTIEDGTISISSVYSQGLLRTLTKSLQGSGVDLSQASLSVQIEIGKQGNIRPKCTAVQSEGSWHSG* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02302 488 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 411 477 IPR044295 GO:0003700|GO:0006351|GO:0046983
Pte2g02302 488 Gene3D - 255 336 IPR036638 GO:0046983
Pte2g02302 488 MobiDBLite consensus disorder prediction 1 39 - -
Pte2g02302 488 MobiDBLite consensus disorder prediction 148 203 - -
Pte2g02302 488 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 256 325 IPR036638 GO:0046983
Pte2g02302 488 MobiDBLite consensus disorder prediction 333 352 - -
Pte2g02302 488 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 258 314 IPR011598 GO:0046983
Pte2g02302 488 SMART finulus 264 320 IPR011598 GO:0046983
Pte2g02302 488 MobiDBLite consensus disorder prediction 247 275 - -
Pte2g02302 488 Pfam Helix-loop-helix DNA-binding domain 260 315 IPR011598 GO:0046983
Pte2g02302 488 CDD bHLH_AtBIM_like 257 337 - -
Pte2g02302 488 MobiDBLite consensus disorder prediction 176 203 - -
Pte2g02302 488 MobiDBLite consensus disorder prediction 247 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02302 Pte-Chr2 42718124 42724227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02302 1 469 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 42.553 1.40e-83 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte2g02302 HLH 3.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02302 - - cpap:110823217 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02302 2 42718124 42724227 Pte2g02302 2 42718124 42724227 RCT