Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte2g02285 | ATGTATGCACCGATTGATGCCAACGCTGACGGCAGTGACCCCATAATTTCATATTCTAGCCAACTATTTCTCTACAGTCCTTTTACAAGTGAAATTACCCCCAATCCTCAAGAGAATCCTGCACCTCTTTTCCCTATCTTTGACTTCCACCTCCCCTTTGAAGATCATGATGATTTGTTTTATCATGACCTTTTATTTCACCATCAACCTTTAGCTGAGCAGGCAGCTGATCAAGTTTCTATAGCCAGTGGCATTCAGATTTCAAACCGAGTGCACAGTATGGATCAACATGTAAGAGTGACTTCTACTGGTGACCATGACCACCAGAAGCAGTACCAGACCCCAAGAAAAAGAACTTCCAAGAGGGACCGTCACACAAAGATTGACACAGCTAAAGGGCCAAGGGATCGCCGAATGAGACTGTCCCTTGAAGTTGCCAGGAAGTTTTTTGGTTTGCAAGACATGTTGCGTTTTGATAAAGCTAGCAGAACAATTGAGTGGTTACTTAATCAAGCCAAATATGAAATCAAGCGGCTTGAAAGAGAAACCAACTTCCCAGTTGGTACCAATGCTGGCTGTTCACCTTCAGAAAGCGAAGTTGTATCAGGTCTGAATGAAGTTACAGCGAGTGCTAGCAATGACAAACAAGCGGAGGCTAGACCTTCAGAGAAACCTAGAAAAAGTAGGCAGTCCAGGAAGACTGTTTCCCACTCTCGCACAAAGGAGATTAGAGAGAGAGCAAGAGCAAGAGCCAGAGAGAGGACTAAGGAAAAGAATATGAGGAGCCAGGAATTTGCACAGGAGGAGGGCTCAGGGCATTGCAATGAGGCAACTAACCACAAGTTCAGTATATTTGGTGAACACGCACGTACCCAATGCCAATATAGCACCAATGGATCGTTAGATGTGAAGTCCAAAGCTCAAGAACGAAGCTTTCAAATAAAGGAGCAATCTGGGGTTTTCAATATGGACCAATGTTCAAGGACTATGAGCAAATGGAATTTACCTTTTTCCTTCGATTCCCTGCACAACCCTCAAACAACACTATTTTTTCCTTTTCCGGGCATCGATCAGTTTCCACTTCCAGCATTGCAGTTCTTGGACAAGCAATGGGAAACCTGCGACAATCACAACCTTCGCTGA | 1143 | 0.4427 | MYAPIDANADGSDPIISYSSQLFLYSPFTSEITPNPQENPAPLFPIFDFHLPFEDHDDLFYHDLLFHHQPLAEQAADQVSIASGIQISNRVHSMDQHVRVTSTGDHDHQKQYQTPRKRTSKRDRHTKIDTAKGPRDRRMRLSLEVARKFFGLQDMLRFDKASRTIEWLLNQAKYEIKRLERETNFPVGTNAGCSPSESEVVSGLNEVTASASNDKQAEARPSEKPRKSRQSRKTVSHSRTKEIRERARARARERTKEKNMRSQEFAQEEGSGHCNEATNHKFSIFGEHARTQCQYSTNGSLDVKSKAQERSFQIKEQSGVFNMDQCSRTMSKWNLPFSFDSLHNPQTTLFFPFPGIDQFPLPALQFLDKQWETCDNHNLR* | 381 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte2g02285 | 380 | ProSiteProfiles | TCP domain profile. | 121 | 179 | IPR017887 | - | |
Pte2g02285 | 380 | MobiDBLite | consensus disorder prediction | 189 | 216 | - | - | |
Pte2g02285 | 380 | Coils | Coil | 162 | 182 | - | - | |
Pte2g02285 | 380 | MobiDBLite | consensus disorder prediction | 99 | 135 | - | - | |
Pte2g02285 | 380 | MobiDBLite | consensus disorder prediction | 217 | 264 | - | - | |
Pte2g02285 | 380 | MobiDBLite | consensus disorder prediction | 189 | 273 | - | - | |
Pte2g02285 | 380 | MobiDBLite | consensus disorder prediction | 99 | 116 | - | - | |
Pte2g02285 | 380 | Pfam | TCP family transcription factor | 119 | 261 | IPR017887 | - | |
Pte2g02285 | 380 | ProSiteProfiles | R domain profile. | 241 | 258 | IPR017888 | - | |
Pte2g02285 | 380 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 83 | 315 | IPR005333 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte2g02285 | Pte-Chr2 | 42575335 | 42576801 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte2g02285 | 117 | 256 | TCP Transcription Factor Family | AT3G18550 | 42.581 | 5.20e-25 | 103 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | TCP | Pte2g02285 | TCP | 7.7e-41 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte2g02285 | - | - | qsa:O6P43_023000 | 206.838 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte1g02340 | 1 | 44020145 | 44025685 | Pte2g02285 | 2 | 42575335 | 42576801 | RCT | |
Pte2g02285 | 2 | 42575335 | 42576801 | Pte2g02285 | 2 | 42575335 | 42576801 | RCT |