Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02267 ATGGCTTTGATTGTCAGAGCCTACAATGTGATATTGCTGGCGTTTTTACTACTGGTACCAACTGAACGAGTTAAGGCGGAACCGACCACAGACAAGCAAGCCCTCCTTGCTTTCCTCTCTCAAACCCCACACGCCAAGCGTATCAAATGGAATCAGTCTGAATCAGTCTGCAATTGGGTCGGAGTTGGTTGTGATTCTAATGAAACATTCATAATCAAGATTCATCTCCCTGGTGCTGGTCTTGTGGGAGCAATTCCACCCAACACCATCGGTCGTTTGAGTCAGCTCCGGGTTCTCAGTCTCCATTCCAATCGTATTGCTGGTGAGATTCCTTCAGATTTTGCCAATCTCACCCTCCTTCGTAGCCTTTACCTACATAAGAACGAACTCACAGGCGAGTTCCCGGTCAGTCTGACTGGTTTGTCTCGTCTGGTTCGTCTTGATCTATCGTTCAACAACTTCACTGGCTCAATACCTTTCTCCATCAACAATCTCAATCACTTGACTGCTCTGCTGTTGGAAAACAATGCATTCTCAGGTGACTTAGTAAGCATCTCAGCTCAATTGAACAAATTCAACGTTTCAAATAACCATCTCAATGGTTCAATCCCTAAAACGCTTTCCAAATTCCCTGCTTCCTCATTTGCTGGTAACTTAGGTTTATGTGGTCAACCATTGCCATCTTGTAGCTCCTTCGCGCCAGCACCATCACCTTTAGGAGTTTCACTACCAACTACACCACATAAAAAATCCAAGAAACTTTCGAAACTCGCCCTTGTATTGATTGCAGTTGGCTGTTCTCTACTTCTGTTGCTATTAATCTCACTCCTCTTTGTATTTGTACGAAAGCACCATCGCCAACAATCCGTGAGATCACCAAAGCCTATTGTGACATCGCAAGCTGCACCATCAGGTGAGGCGGGGCCATCGTCATCAAAAGATGATATTGTTGGAGGGTCTGGAGAGAGCGAGAGTAACAAGCTGATGTTCTTTGGAGGTGGGATTTACAGTTTTGGCTTAGAGGATTTGTTGAGAGCTTCTGCTGAGGTTTTGGGCAAAGGAACCGTTGGAACTTCGTACAAAGCAGTGTTAGAAGAAGGCACTACAGTCGTGGTGAAGAGGTTAAAGGACGTTGTTCTGACGAGGAGAGAGTTCGATACACATATGGAATTTCTGGGAAACATCAAACACGACAATGTAGTTGCACTGAGAGCATTTTACTTCTCCAAGGATGAGAAATTGCTTGTTTATGATTACATGTCCGCCGGGAGCATGTCAGCTCTGCTTCACGGAAGCAGAGGCTCCGGCCGGACACCGTTAGACTGGGACAGCCGCATGAGAATAGGACTGAGTGCTGCTAAAGGCCTTTCTCATCTACACGTTTCCGGCGTGGTTCATGGCAACATCAAAGCCTCCAACATACTTCTCAAAAGCAATCATTACGCATGCCTCTCAGACTACGGACTCAACCCGCTTTTTAGCACCTCAACTTCGCCCCAACGGATTGCTGGTTACCGGGCCCCTGAAGTTATGGAAACCCGAAAGGTGACATTCAAGTCAGACGTTTACAGCTTTGGAGTATTGCTGTTGGAACTGTTGACAGGCAAAGCACCCAATCAGACTTCATTTGGAGAGGAAGGGATTGATCTTCCCAGGTGGGTTCAGTCCGTAGTTCGTGAAGAGTGGACCGCTGAGGTCTTTGATGTGGAGCTGACGAGGGACCGTAATATTGAAGAAGAAATGGTTGAGCTGTTGCAGATAGCTATGGCGTGTGTCTCAATGGCACCGGACCAGAGACCGGACATGAGACAAGTATTGCGTATGATTGAGGATATGAATAGAGGTGAGACTGCTGACTATGGTTTACAACAGTCATCGGATGACCCATCTAAAGGATCGGACGGTCAGATGTCTCCATCAGAGCCACCTAGATCCCTCATTCCATGA 1947 0.4674 MALIVRAYNVILLAFLLLVPTERVKAEPTTDKQALLAFLSQTPHAKRIKWNQSESVCNWVGVGCDSNETFIIKIHLPGAGLVGAIPPNTIGRLSQLRVLSLHSNRIAGEIPSDFANLTLLRSLYLHKNELTGEFPVSLTGLSRLVRLDLSFNNFTGSIPFSINNLNHLTALLLENNAFSGDLVSISAQLNKFNVSNNHLNGSIPKTLSKFPASSFAGNLGLCGQPLPSCSSFAPAPSPLGVSLPTTPHKKSKKLSKLALVLIAVGCSLLLLLLISLLFVFVRKHHRQQSVRSPKPIVTSQAAPSGEAGPSSSKDDIVGGSGESESNKLMFFGGGIYSFGLEDLLRASAEVLGKGTVGTSYKAVLEEGTTVVVKRLKDVVLTRREFDTHMEFLGNIKHDNVVALRAFYFSKDEKLLVYDYMSAGSMSALLHGSRGSGRTPLDWDSRMRIGLSAAKGLSHLHVSGVVHGNIKASNILLKSNHYACLSDYGLNPLFSTSTSPQRIAGYRAPEVMETRKVTFKSDVYSFGVLLLELLTGKAPNQTSFGEEGIDLPRWVQSVVREEWTAEVFDVELTRDRNIEEEMVELLQIAMACVSMAPDQRPDMRQVLRMIEDMNRGETADYGLQQSSDDPSKGSDGQMSPSEPPRSLIP* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02267 648 FunFam pollen receptor-like kinase 1 315 419 - -
Pte2g02267 648 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 420 621 - -
Pte2g02267 648 Gene3D Phosphorylase Kinase; domain 1 319 419 - -
Pte2g02267 648 Gene3D Ribonuclease Inhibitor 28 185 IPR032675 -
Pte2g02267 648 Pfam Leucine rich repeat N-terminal domain 30 65 IPR013210 -
Pte2g02267 648 Gene3D Ribonuclease Inhibitor 186 233 IPR032675 -
Pte2g02267 648 MobiDBLite consensus disorder prediction 291 319 - -
Pte2g02267 648 MobiDBLite consensus disorder prediction 614 648 - -
Pte2g02267 648 CDD STKc_IRAK 351 612 - -
Pte2g02267 648 PANTHER OS05G0588300 PROTEIN 11 623 - -
Pte2g02267 648 MobiDBLite consensus disorder prediction 618 640 - -
Pte2g02267 648 FunFam Probable inactive receptor kinase RLK902 28 186 - -
Pte2g02267 648 Pfam Protein tyrosine and serine/threonine kinase 349 607 IPR001245 GO:0004672|GO:0006468
Pte2g02267 648 Gene3D Transferase(Phosphotransferase) domain 1 420 630 - -
Pte2g02267 648 SUPERFAMILY Protein kinase-like (PK-like) 349 609 IPR011009 -
Pte2g02267 648 SUPERFAMILY L domain-like 32 210 - -
Pte2g02267 648 MobiDBLite consensus disorder prediction 291 307 - -
Pte2g02267 648 Pfam Leucine rich repeat 83 130 IPR001611 GO:0005515
Pte2g02267 648 ProSiteProfiles Protein kinase domain profile. 345 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02267 Pte-Chr2 42359565 42363006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02267 9 637 Receptor kinase-like Gene Family AT5G58300 49.922 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte2g02267 PK_Tyr_Ser-Thr 9.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02267 - - qsa:O6P43_023032 882.093