Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02263 AGAATGTTATCTCCTTCTGAACTCACCCTTGACTGCAAACCTCATGGCTTCTCCATGCCATTGAAATGCTTTGGGGATCAGACTGATCAAACCTACAAGCTTCAAGAGTTTCTATCTCGCCTAGAGGAAGAGCGCCTCAAAATTGACGGTTTGAAGCGCGAGCTCCCTCTTTGCATTCATCTTCTCACTAACGCTATAGATGCTTCAAGGCAGCAATTGCAGGTATTCAGAACGAACCAGGGTGCGAGACCAGTTCTTGAAGAATTTATGCCAATGAAGCATTCCAACTCTGGAAAACATGAGAAGGCATCTATGAACTCTGATATGGCAAATTGGATGACAACATCTCAAATATGCAGCCAAGCAAATGAAGGTACAAAACCACAGTCCGGAATCCCATCACCCCAGGAAACAGAAATTGGCCTTAATATTGTCAGCCCCAAGCTCGCTTTAAAACCCAAACACAGAATTGGAGGAGCCTTTCTTCCATTTTCAAAAGATAGAAATTCTTCTACAGATTCCATAATAAGAGCTCTTCCTGAGCTAACCCTTGCATCGTCTGAGAAAGACATGGAAGACAAGAAATCTTCAGAACCTGATCAGTATGGAGTTCGCCTATGTCCAAGGAGGGAGACTTATGCTAAAGCAGGCACTGGTGGGGTTGTAGTAGAGCAAGAAAAAGGGCGTATCAGTCACTCTGAGGTACAAACAGCAACAGCTTCTGCCATATACAAACCAAGTAACCAACCTCATAGGAAAGCAAGGAGGTGTTGGTCACCAGACCTGCACAGACGATTTGTCAATGCTCTACAGATGCTTGGAGGCTGTCAAGTGGCCACACCCAAACAGATAAGAGAGCTGATGAAGGTTGATGGTTTAACCAATGATGAAGTTAAAAGCCATCTTCAGAAGTACAGGCTGCACACTAGACGACCCAGTCTAAGCCCACAGGCGGCTGGAGCACCAGGTCCTCAGCTAGTTGTACTTAGAGGCATCTGGTTTCCCCCAGAGTATGCGTCAGCAGCAGCAGCCCATACGGGGAGCCATTCCCTCTACACAACCCATCCAGCACCCCATGCAGCACCATCACCTTACTGTGCTGCCACTCCTGTACCGCCGGAGTTCTACACAGCTGCATCATCTCAGCCTCCGCTGCCTCCTCCGCTTGACCACCACCCTTTACATCACCAGGTTCACATGTATAATAAAGCCACCTCCCACGGCCACAGTTCACCGGAATCTGACATCAGAGGAAATGGAGACAGATCTGAGAGTATTGAAGATGGGAAGTACGAAAACAGTAGCTCGAAGGGTACTGAAAATGGTGAGAAC 1332 0.4737 RMLSPSELTLDCKPHGFSMPLKCFGDQTDQTYKLQEFLSRLEEERLKIDGLKRELPLCIHLLTNAIDASRQQLQVFRTNQGARPVLEEFMPMKHSNSGKHEKASMNSDMANWMTTSQICSQANEGTKPQSGIPSPQETEIGLNIVSPKLALKPKHRIGGAFLPFSKDRNSSTDSIIRALPELTLASSEKDMEDKKSSEPDQYGVRLCPRRETYAKAGTGGVVVEQEKGRISHSEVQTATASAIYKPSNQPHRKARRCWSPDLHRRFVNALQMLGGCQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSLSPQAAGAPGPQLVVLRGIWFPPEYASAAAAHTGSHSLYTTHPAPHAAPSPYCAATPVPPEFYTAASSQPPLPPPLDHHPLHHQVHMYNKATSHGHSSPESDIRGNGDRSESIEDGKYENSSSKGTENGEN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02263 444 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 22 435 IPR044787 GO:0003700|GO:0006355
Pte2g02263 444 MobiDBLite consensus disorder prediction 403 444 - -
Pte2g02263 444 SUPERFAMILY Homeodomain-like 251 311 IPR009057 -
Pte2g02263 444 Pfam Myb-like DNA-binding domain 255 306 IPR001005 -
Pte2g02263 444 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 252 310 IPR017930 -
Pte2g02263 444 FunFam Myb family transcription factor 252 310 - -
Pte2g02263 444 Gene3D - 252 310 - -
Pte2g02263 444 Coils Coil 34 54 - -
Pte2g02263 444 MobiDBLite consensus disorder prediction 414 434 - -
Pte2g02263 444 NCBIfam myb-like DNA-binding domain, SHAQKYF class 253 308 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02263 Pte-Chr2 42337960 42339937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02263 2 378 G2-like Transcription Factor Family AT2G03500 48.492 2.55e-103 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte2g02263 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02263 - - qsu:112031181 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02263 2 42337960 42339937 Pte2g02263 2 42337960 42339937 RCT