Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02256 ATGTGTGGTCACCAAGAGGTAGAGCAATTGTCAAGGGAAGGAAGTCATTACAGTTTATCAACTGGAATATTGCCTTCTCTTGGAGGAAGGAGTAACAGGAGAGTCAAGCTCAGGAGTTACATTGTTTCGCCATACGACCGCCGCTACAGGATATGGCAGACTTTTCTGATTGTTTTGGTCACCTATACGGCTTGGGTTTCGCCCTTTGAATTTGGATTTCTGCAAAAATCAACTGGGGCGCTATCAATAGCTGATAATATTGTAAATGGGTTCTTTGCTGTGGATATTGTTCTCACATTTTTCGTAGCTTACATTGATAAAGCTACGTACTTATTGGTTGACGATCGCAAGAAGATTGCCTGGAAATATGCCACTACCTGGTTGGCTTTTGATGTCATTCCCACCATTCCTTCTGAGCTTGCTAGGAAGATTTCCCCTTCTCCTCTCAATTCCTATGGCTTGTTCAACATGCTTCGCCTTTGGCGTCTGCGAAGAGTCAGTGCATTATTTTCTAGACTGGAGAAGGACAAGAATTACAACTATTTCTGGGTTCGATGTGCAAAGCTTATCTGTGTCACCCTTTTCGTGGTTCACTGTGCCGGGTGCTTCTATTACCTTATTGCTGCACGGTATCGAGATCCCACAAAGACATGGATTGGAGCGTCAATGGGGAATTTCCTGGAGCAAAGTTTGTGGATTCGTTATGTGACTTCCATGTATTGGTCCATAACTACTCTGACAACTGTTGGCTACGGAGATCTACACCCAGTGAATACCGGGGAGATGGTGTTTGACATTATATACATGCTTTTCAATCTGGGGTTGACAGCATATTTGATTGGTAATATGACAAACTTGGTTGTCCATGGGACCAGTAGAACAAGGAGATTTAGGGACACCATACAAGCAGCTTCTAGTTTCGCTCAGAGGAATCAACTGCCTGTTCGTTTGCAAGACCAGATGCTGGCACATCTGTCTTTGAAATTCAGAACAGACTCAGAGGGACTGCTGCAGCAAGAGACTTTTGATTCCCTTCCGAAAGCCATCCGATCAAGCATTTCGCATTTTCTATTTTACTCTCTTGTGGACAAAGTTTACTTGTTCAGTGGGGTGTCAAATGACTTGCTTTTTCAGTTGGTCTCAGAGATGAAAGCCGAGTACTTTCCTCCCAGAGAAGATGTCATCCTTCAGAATGAAGCTCCTACAGATTTTTATATACTGGTCAATGCCTGGCTTGCTCTACTGACGGATATGCAGGTTGTTGGTGTGGCCAAAACTGGCGAACTATGTGGGGAGATTGGAGTACTTTGTTACAAGCCACAGCTCTTTACAGTGCGGACGAAGCGTTTAAGCCAGTTACTGAGGCTGAATCGTACCACCTTCTTGCATATTGTTCAAGCCAATGTTGGGGATGGGACCATCATCATGAACAATCTTCTTGAGCATTTGAAAAGCTTGAACGATCCAATTATGGAGGGAGTTTTGGTGGAGACAGAGAACATGCTGGCTCGTGGTAGGATGGACCTACCCCTTAGTCTATGTTTTGCTGCACTTAGAGAAGATGACATGTTGATGCATCAGTTGTTGAAACGAGGGCTTGATCCGAATGAAGCAGATAACAATGGAAGAACAGCTTTGCATATTGCAGTATCAAAAGGAAGTGAGAACTGTGTACTGCTTCTATTGGATTATGGGGGTGATCCCAACATTAGAGATGCAGATGGTAATGTGCCTTTATGGGAGGCTATACTCGGTGGTCATGAATCAACAACCAAACTTTTGATAGACAATGGTGCAAAGTTGAGTAATGGAGATGTCGGCCAATTTGCTTGCACGGCCGTTGAACAAAACAACTTGCATTTGCTCAGGCTTATAGTCCATTATGGAGGAGATGTCACAGTCGCCAATACCAAAGGAACCACTGCCTTGCATGTTGCAGTTTCAGAAGGAAATATGGCTGTGGTAAAATATCTTTTGGATCAAGGGTCTAACATAGACAAACCAGATGCTGATGGCTGGACCCCTAGGGAGCTAGCCGACCAACAAGGACATGAGGACATCATCGAACTTTTTCAATCGAGAAGGGTTCGAAAATCTCATTCTGTCGTCGCAATTTCTGAGAAGCAAGGCTGGAAGCGGTACCTAGAGAGATTTACAAGTGAGCCTGCAATGCGTTTATCATCAAGAGATGGTTCAACATTCTCAGAAGCAACAGCAGATGTATCATGGGGCGAGTGCCACCGTCCAAGGCGCAGGGGCAATGACTTTCACAACTCTTTATTTGGGATTATGTCCACAGCTCATAGAGAAGAGAAAGACTTGTTATTTGGTCACAGAAGAAGTCCAACGATAAGCCCGGGAGGTAATCCTTCTAGAGTTACAATTAGTTGTCCTGAGAAAGGTGACAAAGCTGGGAAGCTTGTGCTTCTCCCAGATAGCTTTCAGGAGCTGCTCGAGATTGGAGTTAAGAAATTTGGTGTGTCTCCCACAAAGGTTCTAAGCAAAAATGGAGCTCAAGTTGAAGATATAGACGTAATTAGAGATGGTGACCAGCTTGTATTTGTGATTGATGATGAAACTAGACAAGCACTTGTAGCGAATGGTGAGGGTTTGTAG 2616 0.4411 MCGHQEVEQLSREGSHYSLSTGILPSLGGRSNRRVKLRSYIVSPYDRRYRIWQTFLIVLVTYTAWVSPFEFGFLQKSTGALSIADNIVNGFFAVDIVLTFFVAYIDKATYLLVDDRKKIAWKYATTWLAFDVIPTIPSELARKISPSPLNSYGLFNMLRLWRLRRVSALFSRLEKDKNYNYFWVRCAKLICVTLFVVHCAGCFYYLIAARYRDPTKTWIGASMGNFLEQSLWIRYVTSMYWSITTLTTVGYGDLHPVNTGEMVFDIIYMLFNLGLTAYLIGNMTNLVVHGTSRTRRFRDTIQAASSFAQRNQLPVRLQDQMLAHLSLKFRTDSEGLLQQETFDSLPKAIRSSISHFLFYSLVDKVYLFSGVSNDLLFQLVSEMKAEYFPPREDVILQNEAPTDFYILVNAWLALLTDMQVVGVAKTGELCGEIGVLCYKPQLFTVRTKRLSQLLRLNRTTFLHIVQANVGDGTIIMNNLLEHLKSLNDPIMEGVLVETENMLARGRMDLPLSLCFAALREDDMLMHQLLKRGLDPNEADNNGRTALHIAVSKGSENCVLLLLDYGGDPNIRDADGNVPLWEAILGGHESTTKLLIDNGAKLSNGDVGQFACTAVEQNNLHLLRLIVHYGGDVTVANTKGTTALHVAVSEGNMAVVKYLLDQGSNIDKPDADGWTPRELADQQGHEDIIELFQSRRVRKSHSVVAISEKQGWKRYLERFTSEPAMRLSSRDGSTFSEATADVSWGECHRPRRRGNDFHNSLFGIMSTAHREEKDLLFGHRRSPTISPGGNPSRVTISCPEKGDKAGKLVLLPDSFQELLEIGVKKFGVSPTKVLSKNGAQVEDIDVIRDGDQLVFVIDDETRQALVANGEGL* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02256 871 SUPERFAMILY Voltage-gated potassium channels 44 288 - -
Pte2g02256 871 Gene3D - 509 693 IPR036770 -
Pte2g02256 871 ProSiteProfiles Ankyrin repeat profile. 574 606 IPR002110 GO:0005515
Pte2g02256 871 Pfam KHA, dimerisation domain of potassium ion channel 792 854 IPR021789 -
Pte2g02256 871 Gene3D Jelly Rolls 333 487 IPR014710 -
Pte2g02256 871 ProSiteProfiles cAMP/cGMP binding motif profile. 367 465 IPR000595 -
Pte2g02256 871 FunFam Potassium channel KAT2 355 487 - -
Pte2g02256 871 ProSiteProfiles Ankyrin repeat region circular profile. 541 572 - -
Pte2g02256 871 ProSiteProfiles Ankyrin repeat region circular profile. 638 669 - -
Pte2g02256 871 ProSiteProfiles Ankyrin repeat profile. 541 573 IPR002110 GO:0005515
Pte2g02256 871 CDD CAP_ED 367 468 IPR000595 -
Pte2g02256 871 Gene3D - 50 288 - -
Pte2g02256 871 PRINTS EAG/ELK/ERG potassium channel family signature 96 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte2g02256 871 PRINTS EAG/ELK/ERG potassium channel family signature 261 272 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte2g02256 871 PRINTS EAG/ELK/ERG potassium channel family signature 62 69 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte2g02256 871 PRINTS EAG/ELK/ERG potassium channel family signature 85 95 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte2g02256 871 PRINTS EAG/ELK/ERG potassium channel family signature 235 252 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte2g02256 871 PRINTS EAG/ELK/ERG potassium channel family signature 279 288 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte2g02256 871 PANTHER POTASSIUM CHANNEL AKT1 14 857 IPR045319 GO:0005249|GO:0006813
Pte2g02256 871 ProSiteProfiles Ankyrin repeat region circular profile. 574 605 - -
Pte2g02256 871 ProSiteProfiles KHA domain profile. 792 871 IPR021789 -
Pte2g02256 871 Pfam Ankyrin repeats (3 copies) 513 602 IPR002110 GO:0005515
Pte2g02256 871 Pfam Ankyrin repeats (3 copies) 613 691 IPR002110 GO:0005515
Pte2g02256 871 SMART cnmp_10 367 480 IPR000595 -
Pte2g02256 871 SMART ANK_2a 574 603 IPR002110 GO:0005515
Pte2g02256 871 SMART ANK_2a 638 667 IPR002110 GO:0005515
Pte2g02256 871 SMART ANK_2a 671 700 IPR002110 GO:0005515
Pte2g02256 871 SMART ANK_2a 541 570 IPR002110 GO:0005515
Pte2g02256 871 SMART ANK_2a 508 537 IPR002110 GO:0005515
Pte2g02256 871 SMART ANK_2a 605 634 IPR002110 GO:0005515
Pte2g02256 871 FunFam Potassium channel SKOR 50 288 - -
Pte2g02256 871 SUPERFAMILY Ankyrin repeat 512 693 IPR036770 -
Pte2g02256 871 Pfam Cyclic nucleotide-binding domain 387 467 IPR000595 -
Pte2g02256 871 ProSiteProfiles Ankyrin repeat profile. 638 670 IPR002110 GO:0005515
Pte2g02256 871 Pfam Ion transport protein 50 294 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pte2g02256 871 SUPERFAMILY cAMP-binding domain-like 292 483 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02256 Pte-Chr2 42297098 42301936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02256 98 857 Ion Channels AT2G26650 68.264 0.0 1065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02256 K21867 - zju:107432387 1346.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02256 2 42297098 42301936 Pte2g02256 2 42297098 42301936 RCT