Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02250 ATGGAGGACAAGAAAGTTTATGTTATTGCTGCCTTTTCAGTGACAGCACTGGTTATTTTCATCATTATATCACGTTTCTGTCTGAAAGAATCAAGGATATTCTTCCTTTTCTGTGGTGCTGCTGTTGCTGTGATTCTTGCAATTTTTGCATTCGTGTTGATCAGACAGCGTTATAAAAACACAAGGACCTTGATAGAGTCTCAATTAAGATCAGAAGGCCGAGAGCTTCGAGTCCAATACAGTTTCCTCAGGAGAGTTGCTGGGGTTCCGACAAATTTCCGGTACGAGGAGCTAGAGGAAGCCACAGACAATTTTCGGTCATTGATAGGTCAAGGAGCATCTGCTTCTGTTTTCAAAGGCATACTCAGTGACGGTACTGTCGTAGCAGTTAAACGAATTGATGGAGAAGAAAGCGGAGAGAAAGAATTCAAATCAGAAGTTGCAGCAATAGCTTGTGTGCAACATGTAAATCTTGTACGCCTTCTAGGCTATTGTCTCGTTCCTTCAGGACCACGTTTCCTTGTCTATGACTACATTCACAACGGCTCCTTGGATTATTGGATTTTCCCTGGAAGGAAAGCAAGCAGGAAAAAGCACCGCAGTGGTTGCTTGTCTTGGGACTTGAGGTACAAAGTTGCGATTGAGGTTGCCAAAGCACTGTCTTACATTCATCATGACTGCAGGTCAAGAATCTTACACCTTGATGTGAAGCCAGAAAACATACTTTTGGATGAGAATTATCGAGCACTTTTGTCCGATTTCGGTCTTTCGAAGCTTGTAGGGAAAGAAGAGAGCAAAGTCATCACTTCAATCAGAGGTACTAAAAGTTACTTAGCTCCTGAATGGGTTTTGGAGAATGGGATCACTGAAAAATGTGATGTCTACAGCTATGGTATGGTTCTGTTAGAAATGGTAGGAGGAAGAAGAAACGTATTTTATACAGAAGGCGATGGCGAAAAGTCGAAAAGGAGATGGCAATTTTTTCCAAAGATTGTAGTTGAGAAGTTGAAAGAAGGAAAGCTGATGGAAATTGTGGATGAAAGGATGGTGCAGATTGGAGGTATTGATCAAAGGGAATTGAGAAGATTGGTTTATGTAGCAATATGGTGCATACAAGAGAGGACAAGTTTGAGGCCTAGTATGTCTCTAGTGGTTGACATCCTTGAAGGTCGTGTCAGTGTGGATGAGCCCCCTCATGATACCCGAATGGTGATGCTTGATTTGTTGTTTGATGATGATGATTATGAAGGATCGGTTGATGTTAATGTCATGGCAAGGCTGGCTGCTAAGGCACCCAAGCAAGAGAACTCCAGTAATGCAACCATGTCTACTTGGGCAAACTCATTTTTATCTGGAAGATAG 1362 0.4214 MEDKKVYVIAAFSVTALVIFIIISRFCLKESRIFFLFCGAAVAVILAIFAFVLIRQRYKNTRTLIESQLRSEGRELRVQYSFLRRVAGVPTNFRYEELEEATDNFRSLIGQGASASVFKGILSDGTVVAVKRIDGEESGEKEFKSEVAAIACVQHVNLVRLLGYCLVPSGPRFLVYDYIHNGSLDYWIFPGRKASRKKHRSGCLSWDLRYKVAIEVAKALSYIHHDCRSRILHLDVKPENILLDENYRALLSDFGLSKLVGKEESKVITSIRGTKSYLAPEWVLENGITEKCDVYSYGMVLLEMVGGRRNVFYTEGDGEKSKRRWQFFPKIVVEKLKEGKLMEIVDERMVQIGGIDQRELRRLVYVAIWCIQERTSLRPSMSLVVDILEGRVSVDEPPHDTRMVMLDLLFDDDDYEGSVDVNVMARLAAKAPKQENSSNATMSTWANSFLSGR* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02250 453 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Pte2g02250 453 SUPERFAMILY Protein kinase-like (PK-like) 85 388 IPR011009 -
Pte2g02250 453 Gene3D Phosphorylase Kinase; domain 1 67 178 - -
Pte2g02250 453 FunFam Putative receptor-like protein kinase 179 396 - -
Pte2g02250 453 Pfam Protein kinase domain 107 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02250 453 ProSiteProfiles Protein kinase domain profile. 103 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02250 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Pte2g02250 453 SMART serkin_6 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02250 453 PANTHER OS07G0415500 PROTEIN 32 399 - -
Pte2g02250 453 FunFam Putative receptor-like protein kinase 70 178 - -
Pte2g02250 453 Gene3D Transferase(Phosphotransferase) domain 1 179 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02250 Pte-Chr2 42258920 42260464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02250 1 398 Receptor kinase-like Gene Family AT5G20050 60.250 8.36e-171 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pte2g02250 Pkinase 3.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02250 - - qsa:O6P43_023053 588.571