Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte2g02234 | ATGGTGCAGTCGTACAGAGGAGTCAGACAACGCCATTGGGGTTCTTGGGTATCTGAAATTCGCCATCCACTTCAGAAGAGGAGGGTTTGGCTAGGCACATTTGAATCAGCCGAAGAAGCAGCCAAAGCCTATGACCAAGCAGCCATTTTAATGAGCGGCAGAAACGCGAAAACCAACTTCCCAATATCTCAAACATCGTGCGGTGAACCCAAACCAGTTGAGGATTCCCCATCTTCACCAAAAGGTCTATCAGAGATACTCCATGCAAAGCTTAGGAAGTGCAGTAAGGCGCCATCCCCATATATGACTTGCTTGAGGCTTGACACAGAGAATTCTTATATCGGAGTGTGGCAAAAGCGTGCAGGCCAACGTTCTGATGCCAATTGGGTTATGACTGTCAAGCTAGGAAAGAATCATTTCAGCAATGCCGATGGCAAGGATAGGGATTGTACCTCCGCTTCACTTGATCATGATGATCCGTCTCCACATGCAACTGAGAACCAGGAAGTGAGAGCAGAAATGGATGAGGAGGAGAGGATAGCACTTCAAATGATAGAAGAACTTCTTAATCGGAACAGCCCTAACCACCCTTCTTTTGATATTCAAGCTGATGAAGCAGGAGACAGTTTTTAA | 633 | 0.4645 | MVQSYRGVRQRHWGSWVSEIRHPLQKRRVWLGTFESAEEAAKAYDQAAILMSGRNAKTNFPISQTSCGEPKPVEDSPSSPKGLSEILHAKLRKCSKAPSPYMTCLRLDTENSYIGVWQKRAGQRSDANWVMTVKLGKNHFSNADGKDRDCTSASLDHDDPSPHATENQEVRAEMDEEERIALQMIEELLNRNSPNHPSFDIQADEAGDSF* | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte2g02234 | 210 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 4 | 160 | - | - | |
Pte2g02234 | 210 | Gene3D | AP2/ERF domain | 4 | 63 | IPR036955 | GO:0003700|GO:0006355 | |
Pte2g02234 | 210 | FunFam | Ethylene-responsive transcription factor 2 | 3 | 62 | - | - | |
Pte2g02234 | 210 | CDD | AP2 | 5 | 63 | IPR001471 | GO:0003700|GO:0006355 | |
Pte2g02234 | 210 | Coils | Coil | 167 | 187 | - | - | |
Pte2g02234 | 210 | PRINTS | Ethylene responsive element binding protein signature | 5 | 16 | IPR001471 | GO:0003700|GO:0006355 | |
Pte2g02234 | 210 | PRINTS | Ethylene responsive element binding protein signature | 27 | 43 | IPR001471 | GO:0003700|GO:0006355 | |
Pte2g02234 | 210 | MobiDBLite | consensus disorder prediction | 189 | 210 | - | - | |
Pte2g02234 | 210 | SMART | rav1_2 | 4 | 67 | IPR001471 | GO:0003700|GO:0006355 | |
Pte2g02234 | 210 | MobiDBLite | consensus disorder prediction | 60 | 82 | - | - | |
Pte2g02234 | 210 | Pfam | AP2 domain | 5 | 52 | IPR001471 | GO:0003700|GO:0006355 | |
Pte2g02234 | 210 | SUPERFAMILY | DNA-binding domain | 4 | 63 | IPR016177 | GO:0003677 | |
Pte2g02234 | 210 | ProSiteProfiles | AP2/ERF domain profile. | 4 | 61 | IPR001471 | GO:0003700|GO:0006355 | |
Pte2g02234 | 210 | MobiDBLite | consensus disorder prediction | 140 | 174 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte2g02234 | Pte-Chr2 | 42148135 | 42148984 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte2g02234 | 1 | 192 | AP2-EREBP Transcription Factor Family | AT1G15360 | 57.843 | 2.72e-69 | 208 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Pte2g02234 | AP2 | 4.4e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte2g02234 | - | - | jre:108995608 | 288.115 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte2g02234 | 2 | 42148135 | 42148984 | Pte3g01124 | 3 | 9609028 | 9611491 | RCT | |
Pte2g02234 | 2 | 42148135 | 42148984 | Pte2g02234 | 2 | 42148135 | 42148984 | RCT |