Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02230 ATGGCTGCTCTTAGACGAGAAGTAAGGCGCTATGCCCCACTGGTCTCTCGTCAACCTAACACAATCCGATCCTCATTACCCGAGGAGCAGATTCCTCTGGGAATGCGCTTCATTTCAACCCAAGTTGTCAGGAACAGGATGAAGAGTGTAAAGAATATCCAGAAGATTACAAAGGCTATGAAGATGGTTGCAGCATCAAAGCTGCGTGCAATCCAGTCTAGAGCTGAAAATTCTCGTGGACTATGGCAGCCATTTACTGCTCTTCTTGGTGACACTCCAAGTGTTGATGTCAAGAAGAACGTTATTGTTACCATTTCATCTGACAAAGGTCTCTGTGGTGGTATCAATTCCACATCAGTCAAAATCAGCAAAGCATTGCATAAGTTGAGCTCTGGTCCTGAAAAAGAATCAAAATATGTGGTTTTGGGAGAGAAGGCAAAGGCTCAATTTGTGCGTGACTCAAAGAACGACATTCTGATTTGCATAACCGAGCTTCAGAAAAATCCTTTGAATTATACTCAGGTCTCTGTTCTTGCCGATGACATCTTAAAGAATGTTGAATTTGACACATTAAAGATTGTCTTCAACAAGTTCAACTCTGTTGTCTCGTTTCTGCCCACAGTGTCAACTGTGTTATCCCCCGAGATTGTCGAGAGAGAGGCAGAATCTGGGGGAAAGCTCGGTGACCTGGACTCCTATGAGATCGAAGGTGGAGAAACTAAGTCAGAAGTACTACAGAATCTGACTGAATTCCAGTTTTCTTGTGTTTTATTCAATGCTGTATTGGAGAATGCTTGCAGTGAGCAAGGAGCGAGAATGTCTGCGATGGATAGCTCTAGCAGAAATGCAGGAGAAATGCTTGATCGTCTCACCCTCACCTATAACAGAACTCGTCAAGCATCAATCACTACTGAATTGACTGAGATTATTTCTGGAGCTTCAGCTCTGGAGGGCTAA 957 0.4357 MAALRREVRRYAPLVSRQPNTIRSSLPEEQIPLGMRFISTQVVRNRMKSVKNIQKITKAMKMVAASKLRAIQSRAENSRGLWQPFTALLGDTPSVDVKKNVIVTISSDKGLCGGINSTSVKISKALHKLSSGPEKESKYVVLGEKAKAQFVRDSKNDILICITELQKNPLNYTQVSVLADDILKNVEFDTLKIVFNKFNSVVSFLPTVSTVLSPEIVEREAESGGKLGDLDSYEIEGGETKSEVLQNLTEFQFSCVLFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELTEIISGASALEG* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02230 318 PIRSF ATP_synthase_gamma 7 316 - -
Pte2g02230 318 ProSitePatterns ATP synthase gamma subunit signature. 302 315 IPR023632 -
Pte2g02230 318 Gene3D - 63 275 - -
Pte2g02230 318 FunFam ATP synthase subunit gamma 63 275 - -
Pte2g02230 318 Pfam ATP synthase 41 316 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte2g02230 318 NCBIfam ATP synthase F1 subunit gamma 39 316 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte2g02230 318 Hamap ATP synthase gamma chain [atpG]. 37 316 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte2g02230 318 Gene3D ATP synthase, gamma subunit, helix hairpin domain 43 313 - -
Pte2g02230 318 PANTHER ATP SYNTHASE GAMMA CHAIN 37 316 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte2g02230 318 FunFam ATP synthase gamma chain 271 313 - -
Pte2g02230 318 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 40 316 IPR035968 GO:0015986|GO:0045261|GO:0046933
Pte2g02230 318 CDD F1-ATPase_gamma 39 313 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte2g02230 318 PRINTS ATP synthase gamma subunit signature 263 282 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte2g02230 318 PRINTS ATP synthase gamma subunit signature 97 116 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte2g02230 318 PRINTS ATP synthase gamma subunit signature 189 206 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte2g02230 318 PRINTS ATP synthase gamma subunit signature 294 315 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02230 Pte-Chr2 42094083 42097194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02230 10 316 Primary Pumps ATPases AT1G15700 32.222 1.65e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02230 K02136 - qsa:O6P43_022908 543.502