Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02224 ATGGTGGTAGAAGAGGCGCTGGGAAATAAAGGGTCATGCTATTGCAAAAAGACGAAAGGGAAAGTCCCTAAACGTGTTCACAAGGCTGAAAGAGAGAAATTGAAGCGCGAAGAATTGAATGACCTTTTTCTTAAGCTGGCCAATGCTCTTGAATTGGCAGACAACAGTGGGAAGGCATCAATGTTGTGTGAAGCTACTCGACTGTTAAAGGACTTGTTTGATCAGATGAAGCGTCTCAAAAAGGAGCATGCGTCTCTCCTGTCTGAATCTCATTATGTGACAATAGAGAAGGATGAACTGGAGGAGGAAAAAACTGTTTTAGAAACTCAAGTCGAGAAGCTAAAGGGAGAGCTGGAATCAAGAGCCACAATATGTAAACCTGACCTCAATGTTGATCCTTTGAAATTCCAGCAGCTAGAACTGACATCAAAGTTTACAGGAGATGGTTTCAGTTTGCCTGCTGCAGAACCAACTTTAAATCAGGGAGCTTCAGTCTTTGTCGTGCCCGTCCATAATGCGCTTCAAGGTTTTCAAGTGGCAAGTGGTGCTGAAGTTGCCTCAAGACTTCCTAATATTAGCAAACCGCATGCGAGGTATCCCACCCCTGCAGATTCGTGGCCATCCAAGCTGCAAGGAGCCAACCTCCAGCTAAATTAA 657 0.446 MVVEEALGNKGSCYCKKTKGKVPKRVHKAEREKLKREELNDLFLKLANALELADNSGKASMLCEATRLLKDLFDQMKRLKKEHASLLSESHYVTIEKDELEEEKTVLETQVEKLKGELESRATICKPDLNVDPLKFQQLELTSKFTGDGFSLPAAEPTLNQGASVFVVPVHNALQGFQVASGAEVASRLPNISKPHARYPTPADSWPSKLQGANLQLN* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02224 218 Coils Coil 69 89 - -
Pte2g02224 218 Coils Coil 97 117 - -
Pte2g02224 218 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 23 72 IPR011598 GO:0046983
Pte2g02224 218 PANTHER TRANSCRIPTION FACTOR BHLH47 10 214 - -
Pte2g02224 218 MobiDBLite consensus disorder prediction 196 218 - -
Pte2g02224 218 Gene3D - 20 97 IPR036638 GO:0046983
Pte2g02224 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 24 98 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02224 Pte-Chr2 42059415 42062906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02224 19 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 48.387 4.37e-58 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02224 - - cit:102621965 229.565