Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02201 ATGGCGGTTGACCTTATGGGTCACCCCAGTGTAGATGAGGATATGGCCATACAAGAGGCTACAGCTCAAGGCATCAAAAGCATGGAGCACCTGATTCGTCTTCTGTCTCACCAACCACATCATTCTGATTCCCTCAACCTTACCGATCTTACTGTTTCCAAGTTCAAAAAGGTCATTTCACTTTTAAACCGGTCGGGTCATGCCCGGTTCAGGCGCGGACCGGTTAATCCATCCTCCTCCTCTTCTTCGTTGACATTACCCTCTCCTCCGTCAACGTCTGCGTTTTCATCTATTGTGTCACGCTCACAAGTACTGGAGGAAAACCCACATCCGGCTCTCCCAGTGACGACTGCTATTACTCCTGCATCGATTTCTTCTCCGCCACGCGTCGTAGCGCCGGTGACCACTCATCACGCCGCAATCTCTGCTCCAAGCAGCTTCATCTCCGCTCAGTTGCAGAGCGTGATCGATTTTACTAAGCCTAATACTTTGAGCTCCAATGGAAAAGCTAAAGAGCTAGATTTCACTATGAAAGATAACTTCACTGTTTCATCGAACTCATCGTTCCTTTCTTCTGCCATCACCGGAGATGGAAGTGTCTCAAATGGTAAGCAAGGTTCCTCGCTCTTCCTTACCGCTACCGCCCCCACCACTTCTTGCGGGAGACCGCCGTTTTCTGCTGTTCCGGTCAAGAAACGTTGCCGTGACCACCATGAACAATCAGACGACGTCCCCGCCCAGTTCTCAGGCTCCGATAAATGCCACTGCGTTAAGAAAAGGAAAGATCGAGCGAAGAGGACGATTAGAGTGGCGGCGATCAGTCCAAAAATCGCCGATATTCCAGCGGATGAGTACTCTTGGAGAAAATATGGGCAGAAACCAATCAAGGGATCACCATACCCACGAGGTTATTACAGATGTAGTACGGCAAGGAGGTGTCCAGCGAGAAAACACGTGGAACGTGACAAAGATGATCCAACGATGCTGATCGTGACTTACGAGGGGGAACACCAGCATACCTTTCAACCTGAAGCACATGATAACATCAACGGTGCTGTTGATTTGGTATTCGAGTCAACATTAGAATAA 1089 0.4922 MAVDLMGHPSVDEDMAIQEATAQGIKSMEHLIRLLSHQPHHSDSLNLTDLTVSKFKKVISLLNRSGHARFRRGPVNPSSSSSSLTLPSPPSTSAFSSIVSRSQVLEENPHPALPVTTAITPASISSPPRVVAPVTTHHAAISAPSSFISAQLQSVIDFTKPNTLSSNGKAKELDFTMKDNFTVSSNSSFLSSAITGDGSVSNGKQGSSLFLTATAPTTSCGRPPFSAVPVKKRCRDHHEQSDDVPAQFSGSDKCHCVKKRKDRAKRTIRVAAISPKIADIPADEYSWRKYGQKPIKGSPYPRGYYRCSTARRCPARKHVERDKDDPTMLIVTYEGEHQHTFQPEAHDNINGAVDLVFESTLE* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02201 362 MobiDBLite consensus disorder prediction 69 90 - -
Pte2g02201 362 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 345 IPR044810 GO:0003700
Pte2g02201 362 Pfam WRKY DNA -binding domain 283 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte2g02201 362 MobiDBLite consensus disorder prediction 74 90 - -
Pte2g02201 362 SMART WRKY_cls 281 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte2g02201 362 Gene3D WRKY domain 267 342 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte2g02201 362 ProSiteProfiles WRKY domain profile. 276 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte2g02201 362 FunFam WRKY transcription factor 65 265 342 - -
Pte2g02201 362 Pfam Plant zinc cluster domain 231 279 IPR018872 -
Pte2g02201 362 SUPERFAMILY WRKY DNA-binding domain 279 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02201 Pte-Chr2 41862957 41865085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02201 1 359 WRKY Transcription Factor Family AT2G24570 51.902 5.73e-101 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte2g02201 WRKY 4.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02201 - - qsa:O6P43_019342 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02201 2 41862957 41865085 Pte2g02201 2 41862957 41865085 RCT