Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02190 ATGAAGCTCAGCTTGTTGATACTAAAGCCTACTGCCCTGGCCATCATTCTGGCATTTGCTGCGGCGATAGCACTCTTCATATTGAATCCATTATGGTATACCAAAATGAAAAGCATCGAGAGCCATGCAAATTCAGACACTGGAAACTCCATTTCTGAACTACAATCTGAAATCGGGGGCAGGGTCAAGTTTACAGATCCTATGAAAACATCCTCAACAAGTTTGTCAAGATTCTTGACCTGGAATGTCAACTACTCTGACAACTCCTTCTCGGATATTGAGAACAAGGTAGCTCCTTTGTTGTTTCTGTTACTGAAGACCACTCCACATCTATCACAGATCTCATACATTGGCCAAGGAGGTCTCTTTTTCTCGTACTACATGAATCAAGATCAGACTTTTGCAATATACTCTAACATTTCAACTGCAGAAAAGAAAAGCTTGTATTTCCTCCAGAATGTAACACATGACACGGGAAAATTGTCTGGAAAAGCAAGCATAAGTCACCCTTTTGTCAATACTAGCTGGTATGAAGAAGCATTAAATAACTCGAACTGGTATACCGCGTTGGGAACTTCATGGCACAATCCTCGTGAGCTTTTGTTTCTTAGTTTATCACGAACAGATGGAAAAGGAGTGATATCTTTGGGATTTCCAGTTACAGCATTAACAAATTTCATCACAAGTGTAAACCTTCGTGGTGGAAGTTTGTACATGGTTTCTAAAGATGGAAGAGTGCTTGTAGAAGGTCTCAAAAACATTCATTTGTCCATTGCTGGTGATGGTCAAGTGTCAATCCCAGTGATGTATTCAAATAATGGTAGGACAAGCAATGGTGGCAATATTTCATGCAAGAAGGAGAAAGCAATTTTAGAAGCTTCTGCATTACATATCCACTCCATCAAGTATACATTCTACTGTTCACCAATCAATATAATGGGAATCGAATCGGTCTATGTTTTGGCTTTCCCACAAAATCAATTCCTCAGCTTTGTCCAGGAATGTATCAAGAAGGGACTGATATTGCTAGTCACAATTATTTTCATGACAGTTATCATTATATTAGATTTCCTTTTTATGATGATTCGAGCTGCTCGACGAGAGATGTGCTTGTGTTCTGCTCTAATTAAACAGATGGAAGCAACACAGCAAGCAGAAAGAAAGAGTATGAATAAAAGTGTCGCCATTGCTAGCGCTAGCCATGACATTCGTGCATCTCTTCTAGGACTCACTGGTTTGATAGAAGAATCGCAAAGGGTCGTCTCCCGATACTCAGATTTGGGGACAAATTTAGCAGACATGCAAACTTGTGCTAATAACTTACTTGGACTGCTGAATTCTATACTTGATACAAGCAAGGTTGAGGCAGGAAAGATGCAGCTTATCGAAGAAGAGTTTGATTTGGCTGAATTTCTGGAACAAGAAGTTGACTTGTATCATCCTGCTGCAATGAGAAAAGGGGTTGACGTGATTTTGGATCCTTGTGATGGATCGATTATTAAATTTCCATTTGTCAAAGGAGATAAAGGAAAACTTCATCAGATAATATGCAATTTATTGAGCAATGCTGTTAAATTTACTGACAAAGGACACGTAACAGTACGTGGATGGATACAGAAACCAAGTTTTGAGAACTCCATAATTTCTCAAGACATTTCCATAAGGCCTATCTTGTGCTTGCTTAGAGGTAAGAAGGGAAAACCTCAAGACATCGAAGAGCCAACCCAACAAGATCCAAAACCTTGGGAACTTGTAGTGGAAGTGGATGACACAGGCAGAGGTATACCCAAAGAGAAGCAAAACGCAGTGTTTGAGAACTATGTTCAAGTCAAAGAAACAAATCTTGACCAAGGGGGTACTGGTTTAGGACTAGGCATTGTGCAATCGCTGGTACATCTGATGCGGGGAGATATTAGCATTGTGGACAAGGACATTGGGGAACAAGGAACTTGCTTCAGGTTCAATGTGCCCTTAACCTTATGTGATAATCCAAGTGACTGTAATAGCAGAGAAAGCAATGATGAATTGGTAGGTGAGAGAAACCTACTAGCTGGACTCACCATTCGAACGTGTGATCTTGGTTCTGGCTTTTGCTCCCCTAGTCCTAGACTGAGGTCTAGTCCTAAGGCACGAGCATCCTGGGTTGTCCTCCTGTTGCAAAATAAGGAGCGTATGATCACTTGTCAAAGATTCATGGAAAGCTTGAGGATCAATGTAACAGTCGTCAAGAAATGGGAACTCCTGTCTCATCAACTCAAGAAGATAAAGCAAAAGCAGTCTCCTTCGCAACATTCTTCAGGGAAATCCAATTCTAATTCTCTAAGTGACCATTCAAGCAGTTTGGCTTCCAAAGAGTCAAGTGCAAAAGAGAAAGAACTGCCTTTAAGCTCAATGGATGGAGTAGACTACACATCTTCTACGTTCAAAAAGACTGCTTTTGGAGCAACACCAACTTTCATTCTTTTGGTAGTTGATACAAATGCTGGACCTTTCATGGAAATCTGTAAAATTATAGCTGATTTCAGAAGAGGGATTTCTAACCCTCTGAAGGTTGTATGGTTAGGGAGGTTCCCGGTAGATGAAATCGGTCTTGAAGGACAAGACATGGATATGTTTGATGAAGACGTCGTCCTATCTCAGCCCTTTCATGGTACTAGATTGTATGAAGTAATAAAACTACTTCCTGAGTTTGCTAGTGGATCGAGAAAAGGTCCATATGAAGAAAGGAGAGTGAGAAACCGCCGGGATGGGAGAGTTTTCAATAAGTCAGTACTCCAAGAGCCTAAACTGAAGGGAAAATCAGAAAGTTCATCTTCCTTGGGAAAACCACTTCAAAGTTTTGATCCAAGAGAGAATGATATGTCAATCCTTAATAAGCAACACAGGAAGGACTCTATTGCCTCTGGTATGGATCAGACATCTGGCCTTACGTCCAAAGCAAAAAAATTCCCGCCATGCTCAGTTCGAAGAAAAGAAGAAACACAAGACTTCGGTAACCCATCAAGCTCTGATAAACCTTTGAGTGGGAAGACACTCTTGCTTGTCGAGGATGATGCACTTATGCGCAAGCTGGCTGCCAAATGTTTAGAAAGACTTGGAGCAAATGTGGAGCAATGTATGAATGGTGAAGAAGCTGTGGAGCTAGTACACATTGGTTTACAAGAGTTGAAGACAGATGGGGCTTCCATTGTTCTCAATCTTCCCTATGATTATATTTTAATGGATTGCCAGATGCCTGTAATGGATGGGTTCGAAGCAACGAGGCGGATAAGGAAGATGGAATTGGAATATGGTACTCATATACCGATAATTGCATTAAGTGCTCATACTTCAGGGTTGGAAACGACCATGACAATTGATGCTGGCATGGACATTCATTTAGGCAAACCTATAAATGGGGAGCGTCTATTAAGAGCTATCAGTCATATTCATAATCAGTATAAGTAA 3447 0.4076 MKLSLLILKPTALAIILAFAAAIALFILNPLWYTKMKSIESHANSDTGNSISELQSEIGGRVKFTDPMKTSSTSLSRFLTWNVNYSDNSFSDIENKVAPLLFLLLKTTPHLSQISYIGQGGLFFSYYMNQDQTFAIYSNISTAEKKSLYFLQNVTHDTGKLSGKASISHPFVNTSWYEEALNNSNWYTALGTSWHNPRELLFLSLSRTDGKGVISLGFPVTALTNFITSVNLRGGSLYMVSKDGRVLVEGLKNIHLSIAGDGQVSIPVMYSNNGRTSNGGNISCKKEKAILEASALHIHSIKYTFYCSPINIMGIESVYVLAFPQNQFLSFVQECIKKGLILLVTIIFMTVIIILDFLFMMIRAARREMCLCSALIKQMEATQQAERKSMNKSVAIASASHDIRASLLGLTGLIEESQRVVSRYSDLGTNLADMQTCANNLLGLLNSILDTSKVEAGKMQLIEEEFDLAEFLEQEVDLYHPAAMRKGVDVILDPCDGSIIKFPFVKGDKGKLHQIICNLLSNAVKFTDKGHVTVRGWIQKPSFENSIISQDISIRPILCLLRGKKGKPQDIEEPTQQDPKPWELVVEVDDTGRGIPKEKQNAVFENYVQVKETNLDQGGTGLGLGIVQSLVHLMRGDISIVDKDIGEQGTCFRFNVPLTLCDNPSDCNSRESNDELVGERNLLAGLTIRTCDLGSGFCSPSPRLRSSPKARASWVVLLLQNKERMITCQRFMESLRINVTVVKKWELLSHQLKKIKQKQSPSQHSSGKSNSNSLSDHSSSLASKESSAKEKELPLSSMDGVDYTSSTFKKTAFGATPTFILLVVDTNAGPFMEICKIIADFRRGISNPLKVVWLGRFPVDEIGLEGQDMDMFDEDVVLSQPFHGTRLYEVIKLLPEFASGSRKGPYEERRVRNRRDGRVFNKSVLQEPKLKGKSESSSSLGKPLQSFDPRENDMSILNKQHRKDSIASGMDQTSGLTSKAKKFPPCSVRRKEETQDFGNPSSSDKPLSGKTLLLVEDDALMRKLAAKCLERLGANVEQCMNGEEAVELVHIGLQELKTDGASIVLNLPYDYILMDCQMPVMDGFEATRRIRKMELEYGTHIPIIALSAHTSGLETTMTIDAGMDIHLGKPINGERLLRAISHIHNQYK* 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02190 1148 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 446 662 IPR036890 -
Pte2g02190 1148 Gene3D - 459 664 IPR036890 -
Pte2g02190 1148 PANTHER TWO-COMPONENT HISTIDINE KINASE 88 1140 - -
Pte2g02190 1148 ProSiteProfiles Response regulatory domain profile. 1011 1144 IPR001789 GO:0000160
Pte2g02190 1148 SMART HKATPase_4 507 660 IPR003594 -
Pte2g02190 1148 SUPERFAMILY CheY-like 1006 1145 IPR011006 -
Pte2g02190 1148 SMART HisKA_10 391 457 IPR003661 GO:0000155|GO:0007165
Pte2g02190 1148 MobiDBLite consensus disorder prediction 922 1008 - -
Pte2g02190 1148 MobiDBLite consensus disorder prediction 756 793 - -
Pte2g02190 1148 PRINTS Bacterial sensor protein C-terminal signature 618 636 IPR004358 GO:0016310|GO:0016772
Pte2g02190 1148 PRINTS Bacterial sensor protein C-terminal signature 584 598 IPR004358 GO:0016310|GO:0016772
Pte2g02190 1148 PRINTS Bacterial sensor protein C-terminal signature 644 657 IPR004358 GO:0016310|GO:0016772
Pte2g02190 1148 PRINTS Bacterial sensor protein C-terminal signature 602 612 IPR004358 GO:0016310|GO:0016772
Pte2g02190 1148 CDD REC_hyHK_CKI1_RcsC-like 1012 1140 - -
Pte2g02190 1148 CDD HisKA 396 453 IPR003661 GO:0000155|GO:0007165
Pte2g02190 1148 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 507 659 IPR003594 -
Pte2g02190 1148 Pfam Response regulator receiver domain 1013 1140 IPR001789 GO:0000160
Pte2g02190 1148 SMART REC_2 1010 1140 IPR001789 GO:0000160
Pte2g02190 1148 Gene3D - 987 1147 - -
Pte2g02190 1148 MobiDBLite consensus disorder prediction 930 945 - -
Pte2g02190 1148 MobiDBLite consensus disorder prediction 756 782 - -
Pte2g02190 1148 ProSiteProfiles Histidine kinase domain profile. 398 660 IPR005467 -
Pte2g02190 1148 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 379 459 IPR036097 GO:0000155|GO:0007165
Pte2g02190 1148 Gene3D - 374 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02190 Pte-Chr2 41769992 41774446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02190 5 1132 Histidine Kinase Gene Family AT2G47430 39.845 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte2g02190 HATPase_c 1.8e-26 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02190 - - qsa:O6P43_007242 1014.6