Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02186 ATGCCGGGATTAACGTGTAATGCTTGCAACAAGGAATTCAAGGACGATGCTGAGCAAAAGCTTCATTACAAGTCTGAATGGCACCGTTACAATCTCAAGCGCAAGGTAGCTGGAGTTCCTGGAGTAACAGAATCATTATTTATTGCAAGACAAACTGCTCTTGCTCAAGAGAAGGACAGATCTACTCCTATGCTCTTTAGCTGTGGCCTCTGTGGAAAAGGATATAGAAGCTTGAAGGCTCATGAACAGCATCTAAAATCAAGAAGCCATCTGCTGCGAGCATCTCAAGGAGACAGTGATCCTGAAGCAGAGAAAGCTATAGTTAAGCCACTTCCAAGCCGGGTCATGAGTAAACCACTCCTTAGAAGAGGAACAGAGAATGTGGGAAATGAAGAAAGTGAAGATGAGTGGGAGGAGGTTGATGCAGAAGAGGAATTGATGGATGATGCTACAAATTCATTGAACAACTTAAATGTTAAAGAACATGCTTCTGAAGATGATGATGACAATGATGACGAAGATGATGTTTTTGAGGAGTTGGATCCAACATGCTGCTTTATGTGTGACCAAGAACATGATAGTTTACAAAGGTGCATGGTTCACATGCACAAGCAACATGGATTTTTCATTCCAGACATTGAGTATTTAAAGGATCCTCAAGGTCTTCTTACATATCTAGGACTAAAGGTCAAGAGGGACTATATATGTCTATACTGCAATGACAGGTGTCATCCTTTCAGCAGTTTAGAAGCTGTTAGGAAGCATATGGAAGCAAAGAGTCATTGCAAGGTGCATTATGGTGATGGTGATGAGGATGAGGATGTAGACCTTGAAGAATTTTATGATTATAGCAGCAGTTATGTCGATGAAAATGGAAAGCAGCTGGTTTTGTCAGGCAATGGAACTGATGGTGTTGAACTTGGTAGTGCCGGGTCTGAGCTCATTATAACCAAACGATCTGATGATAAAGTAGCAACCAAGACACTTGGTTCCCGTGAATTTTTGCGGTATTATCGTCAAAAGCCACGTCCATCACCTGCAAATATGATGATCACTGCTGCCTTGGCTTCAAGGTTTAATTCTTGGTGCTTGTTTTCGGTTCCTTTTGTTGTACCCACATTGTTTTCAAAAATAACGAAACACAAGTTGGCACATTATACCATGAATAACATCACAGGTTGGTTTGCAGGTACAGAAGCATGGGTTTGGCCACTGTACAATCAAGAGAGCAGATTGTCAGGATGA 1245 0.4153 MPGLTCNACNKEFKDDAEQKLHYKSEWHRYNLKRKVAGVPGVTESLFIARQTALAQEKDRSTPMLFSCGLCGKGYRSLKAHEQHLKSRSHLLRASQGDSDPEAEKAIVKPLPSRVMSKPLLRRGTENVGNEESEDEWEEVDAEEELMDDATNSLNNLNVKEHASEDDDDNDDEDDVFEELDPTCCFMCDQEHDSLQRCMVHMHKQHGFFIPDIEYLKDPQGLLTYLGLKVKRDYICLYCNDRCHPFSSLEAVRKHMEAKSHCKVHYGDGDEDEDVDLEEFYDYSSSYVDENGKQLVLSGNGTDGVELGSAGSELIITKRSDDKVATKTLGSREFLRYYRQKPRPSPANMMITAALASRFNSWCLFSVPFVVPTLFSKITKHKLAHYTMNNITGWFAGTEAWVWPLYNQESRLSG* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02186 414 SMART c2h2final6 234 261 IPR013087 -
Pte2g02186 414 SMART c2h2final6 4 28 IPR013087 -
Pte2g02186 414 SMART c2h2final6 66 90 IPR013087 -
Pte2g02186 414 SMART c2h2final6 183 206 IPR013087 -
Pte2g02186 414 SMART ZnF_U1_5 1 35 IPR003604 GO:0003676|GO:0008270
Pte2g02186 414 SMART ZnF_U1_5 63 97 IPR003604 GO:0003676|GO:0008270
Pte2g02186 414 MobiDBLite consensus disorder prediction 118 143 - -
Pte2g02186 414 Pfam C2H2 type zinc-finger (2 copies) 185 286 IPR041661 -
Pte2g02186 414 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Pte2g02186 414 SUPERFAMILY beta-beta-alpha zinc fingers 168 251 IPR036236 -
Pte2g02186 414 ProSitePatterns Zinc finger C2H2 type domain signature. 68 90 IPR013087 -
Pte2g02186 414 PANTHER ZINC FINGER PROTEIN 622 2 359 IPR040025 -
Pte2g02186 414 Coils Coil 140 160 - -
Pte2g02186 414 MobiDBLite consensus disorder prediction 92 107 - -
Pte2g02186 414 SUPERFAMILY beta-beta-alpha zinc fingers 3 36 IPR036236 -
Pte2g02186 414 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02186 Pte-Chr2 41743878 41746938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02186 1 380 C2H2 Transcription Factor Family AT4G31420 63.990 1.35e-161 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02186 K14816 - qsa:O6P43_015595 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02186 2 41743878 41746938 Pte2g02186 2 41743878 41746938 RCT