Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02170 ATGGTTGAAACAGGGCCAACATTTCCAGTGCTGTTCAGAAGGAACTTAAGTGGAGTAACAAAGGGCTTGCCAGTGTTTCACACTGTTGTTGATGATGGTTACTTGCAGCAAAGGAAACATGTCATTGCTCCTAATGACAGCAGATATAGGCTATGGCAGACGTTCCTTATGGCACTGGTGGTATACTCTGCATGGGTGTCTCCTTTCGAAGTAGCATTCAAGCAAGCCGCAAGTCAGCTTGCGGTCTTTGATTTAGCTGTCGACGCCTTCTTTGCTGTTGATATAATATTATCTTTCTTTGTGGCTTACGTGGATCCGTTGACTTATCTTCTCGTCTACGACCACAAAAGGATTGCTCTCAGGTATATCTCTAGACTATATTTTCCAATGGACGTAGCCTCAACCATACCGTTTTTGGAGTTGTACAAAATTTTCAATGGCAAAATGCACCACAGCAGCCAGGTTTTCAGTTTTATTAATTTGCTTCGACTCTGGCGGCTAAGGCTTCTCAGTCAACTGTTCAGGAGGCTGGAAAAGGACATAAGATTTAGGTACTTGGTGACAAGATTGTGCAAAATTGTTTGTGTGACGTTATTTGCAGTACATTCCGCAGGCTGCTTTTACTACTGGCTAGCTGACCATCATACGCCACCAGAACATACATGGATTGGAATGAAAGTCCCGGATTTCAAAGAGAGAAGCATCTGGCTAGGTTACACCTACTCCATTTACTGGGCTGTGACCACCCTAACTACCGTTGGATATGGAGATCTATATCCTGTGACAATGGAAGAAAAGATATTCACTATCTTCTACATGCTATTTAACATTGGATTAACCTCATACATAATAGGAAACATGACAAATCTGATTGTCCATCTTGCTATCCGAACCCTTGCCATGAGGGATACAATGGATCAAGTAATAAGATACGCAACAGAAAATAGACTACCAGAAGGGTTGAAAGAACAAATGCTAACGCACAGGCAACTAAAGTTCAAGACAGCTGAGTTACAGCCGGAAGAAGTCTGGGACAGTTTGCCCAAGACAATCAGATCAAGTATCGCGCAGCATCTTTTCCGACCAACAATCCTTAATACCTATCTATTCAAAGGCGTCTCAGATGATTTTATCACCCAGTTGGTGTCAGAAATTAAAGTAGAGTATTATCCACCAAAGATCGATATTATCATACAAAATGAGAAATCAGTCGATTTCTATATTCTGGTATCAGGATCACTGGTAAAATACCTACCTCTTGTTTTCATTTCTTACCAGCTTGCATAG 1287 0.4149 MVETGPTFPVLFRRNLSGVTKGLPVFHTVVDDGYLQQRKHVIAPNDSRYRLWQTFLMALVVYSAWVSPFEVAFKQAASQLAVFDLAVDAFFAVDIILSFFVAYVDPLTYLLVYDHKRIALRYISRLYFPMDVASTIPFLELYKIFNGKMHHSSQVFSFINLLRLWRLRLLSQLFRRLEKDIRFRYLVTRLCKIVCVTLFAVHSAGCFYYWLADHHTPPEHTWIGMKVPDFKERSIWLGYTYSIYWAVTTLTTVGYGDLYPVTMEEKIFTIFYMLFNIGLTSYIIGNMTNLIVHLAIRTLAMRDTMDQVIRYATENRLPEGLKEQMLTHRQLKFKTAELQPEEVWDSLPKTIRSSIAQHLFRPTILNTYLFKGVSDDFITQLVSEIKVEYYPPKIDIIIQNEKSVDFYILVSGSLVKYLPLVFISYQLA* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02170 428 Pfam Ion transport protein 50 294 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pte2g02170 428 Gene3D Jelly Rolls 334 418 IPR014710 -
Pte2g02170 428 ProSiteProfiles cAMP/cGMP binding motif profile. 369 414 IPR000595 -
Pte2g02170 428 PANTHER POTASSIUM CHANNEL AKT1 36 414 IPR045319 GO:0005249|GO:0006813
Pte2g02170 428 Gene3D - 50 294 - -
Pte2g02170 428 SUPERFAMILY cAMP-binding domain-like 298 415 IPR018490 -
Pte2g02170 428 CDD CAP_ED 369 414 IPR000595 -
Pte2g02170 428 PRINTS EAG/ELK/ERG potassium channel family signature 62 69 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte2g02170 428 PRINTS EAG/ELK/ERG potassium channel family signature 265 276 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte2g02170 428 PRINTS EAG/ELK/ERG potassium channel family signature 239 256 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte2g02170 428 PRINTS EAG/ELK/ERG potassium channel family signature 283 292 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte2g02170 428 PRINTS EAG/ELK/ERG potassium channel family signature 95 104 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte2g02170 428 PRINTS EAG/ELK/ERG potassium channel family signature 84 94 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte2g02170 428 FunFam Potassium channel KAT3 51 293 - -
Pte2g02170 428 SUPERFAMILY Voltage-gated potassium channels 45 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02170 Pte-Chr2 41647111 41649619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02170 14 414 Ion Channels AT4G32650 57.072 5.85e-154 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02170 K21867 - qsa:O6P43_015614 568.54