Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02161 ATGGGTTGCGTGAGTTCGAAGAACATCGTATCGGTGACACCTGCTCTAGACTATTCGGGTGCGTTTAGGAGTAATGTGGGATCAGGAATCTCGGGTGGGAGTAATGTTGGATTGAGCGACTTGGAGAAGAAAAGCAAGAAGAATGAGTCGGTGGGGTTGAGTAGAGGAGGAGGGAGGGAGTTGGGCGAGTCAAGGGGGGAGAGTTCAAATTGCAATTCTGAATCTTTGAGCTTCAGGATGGGTACTTCGCAGAAGGACGTGGAAGGTGAACAGGTAGCTGCCGGTTGGCCAGCTTGGCTTAGTTCTGTCGCCGGTGAAGCAATTCAAGGCTGGGTGCCTCTCCGAGCCGATGCTTTTGAGAAATTGGAGAAGATTGGACAGGGTACATATAGCAGTGTCTTTCGAGCACGTGAACTTGAGACAGGGAAGACAGTTGCTATGAAGAAAGTTCGATTTGATAATTTTGAGCCAGAAAGTGTTAGGTTTATGGCACGTGAAATTATGATCCTTCGCATGTTTGACCATCCAAACATTATAAAATTGGAGGGGATAATCACTTCAAGATTATCTTCTAGCATATACCTTGTGTTTGAATACATGGAACACGACATTGCAGGACTCTTGTCTTGCCCTGATATCAAGTTCAGTGAATCACAGATTAAATGCTACATGAAGCAATTGTTGTCTGGACTAGAGCATTGTCACTCCAGGGGAATAATGCATAGGGATATTAAAGGATCAAATCTTCTGGTAAGCAATGAAGGCATACTAAAAGTGGCTGATTTTGGTTTGGCAAACTTCTCTAATCCTGGATGCAGACAGCCTTTAACGAGTCGTGTTGTCACTTTATGGTACCGTCCTCCTGAACTCCTACTAGGTTCAACAGACTATGGGGCAGCTGTTGATCTCTGGAGTGTAGGCTGTGTGTTTGCAGAACTACTTATAGGAAAACCCATACTACAAGGGACGACTGAGGTTGAACAGTTACACAAAATCTTCAAGCTTTGTGGGACTCCATTAGATGAATACTGGACAAAGTCCAGACTTCCTCATCCCACACTCTGTAGACCGCGGCAACAATATGATAGTTGTGTTAGGGAAACTTTTAGAGATGTTCCTGCCTCTGCTGTGAATCTGATTGAAACTCTTCTCTCTGTAGAACCTTACAAGCGCGGGACTGCCTCCTCTGCTCTTTCATCTGGGTACTTTAAAACAAAGCCATATGCTTGTGATCCATCAAGCTTTCCATCCTACCCACCAAGCAAAGAATTTGATATAAAATTTCGGGAAAGGAATGGTAGAAGAGTTCGTGGACCAGAGAGAAGAAAGCCTACAAGAAAATCACTCAGCATCTCTAAATTAGCACCTACTAAGGATGAGTTAATGACCAAGGGCAGAAATTTGCAAAAATCAAACAGTTATTCTGTTCCCATCATCAAAGAGAACAAGATTAGTCTGCCTGAGGTTGTGCATGCTCCAAAGCCACCAATTACAAGGGAAGATGCTTCCCATGTGAAGAATGCATCTCAAGGAGACATTCCATGTTCTGGTCCTTTACAAGTGTCGACCTCAAGTGGCTTTGCATGGGCGAAAAGACGAAATGATGATACTTGTAAACGATCTCACAGTAGAACTTTATCTAGAGGACATGTATTTGGTACCTTGGAAACATCCACTTGGAGTTCAAGGAACAATTCTGAGGAAAATAAGGATCTTAATGGAGGCTATGCTGACCCTGGAAAGCACGGTACATATGAAAGATCTGAGCTTTCAGTATACGGCCAATGGGGCAAATTTGATCGGCCAGACTCGTTTGATGCTTCTGAAGGCTACCATTCACAAGAATTGTCAATGGTACTTCATGACAGAGAGGAAATGGGTTCAAGAAGAAGTTACCTGAGCTACCAAGATCAAGCACAAAAGGTCGAATTCTCGGGGCCATTACTATCTCAAATGAGTAAAATTGATGAATTATTAGGAAGGCACGAGCGTCATGTCCGTCAGACATCTCGAAAATCATGGTTTCAGATAGGTAAGAAGCATAATGGGTAA 2052 0.4357 MGCVSSKNIVSVTPALDYSGAFRSNVGSGISGGSNVGLSDLEKKSKKNESVGLSRGGGRELGESRGESSNCNSESLSFRMGTSQKDVEGEQVAAGWPAWLSSVAGEAIQGWVPLRADAFEKLEKIGQGTYSSVFRARELETGKTVAMKKVRFDNFEPESVRFMAREIMILRMFDHPNIIKLEGIITSRLSSSIYLVFEYMEHDIAGLLSCPDIKFSESQIKCYMKQLLSGLEHCHSRGIMHRDIKGSNLLVSNEGILKVADFGLANFSNPGCRQPLTSRVVTLWYRPPELLLGSTDYGAAVDLWSVGCVFAELLIGKPILQGTTEVEQLHKIFKLCGTPLDEYWTKSRLPHPTLCRPRQQYDSCVRETFRDVPASAVNLIETLLSVEPYKRGTASSALSSGYFKTKPYACDPSSFPSYPPSKEFDIKFRERNGRRVRGPERRKPTRKSLSISKLAPTKDELMTKGRNLQKSNSYSVPIIKENKISLPEVVHAPKPPITREDASHVKNASQGDIPCSGPLQVSTSSGFAWAKRRNDDTCKRSHSRTLSRGHVFGTLETSTWSSRNNSEENKDLNGGYADPGKHGTYERSELSVYGQWGKFDRPDSFDASEGYHSQELSMVLHDREEMGSRRSYLSYQDQAQKVEFSGPLLSQMSKIDELLGRHERHVRQTSRKSWFQIGKKHNG* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02161 683 SMART serkin_6 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02161 683 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Pte2g02161 683 Gene3D Transferase(Phosphotransferase) domain 1 202 439 - -
Pte2g02161 683 ProSiteProfiles Protein kinase domain profile. 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02161 683 MobiDBLite consensus disorder prediction 65 82 - -
Pte2g02161 683 FunFam probable serine/threonine-protein kinase At1g54610 106 201 - -
Pte2g02161 683 CDD STKc_CDK9_like 119 403 - -
Pte2g02161 683 PANTHER CELL DIVISION PROTEIN KINASE 117 407 - -
Pte2g02161 683 MobiDBLite consensus disorder prediction 559 583 - -
Pte2g02161 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Pte2g02161 683 MobiDBLite consensus disorder prediction 37 82 - -
Pte2g02161 683 SUPERFAMILY Protein kinase-like (PK-like) 113 410 IPR011009 -
Pte2g02161 683 FunFam probable serine/threonine-protein kinase At1g54610 202 443 - -
Pte2g02161 683 Pfam Protein kinase domain 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02161 683 Gene3D Phosphorylase Kinase; domain 1 106 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02161 Pte-Chr2 41579126 41583149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02161 111 458 Core Cell Cycle Gene Families AT5G10270 47.397 9.04e-106 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte2g02161 Pkinase 5.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02161 - - qsa:O6P43_001986 960.674