Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02156 ATGGAGGAGGCTCAAGCAAAAGAGGAAACCCTACCACCAGGGTTTAGGTTTCATCCGACAGATGAAGAGCTGATCACTTACTATCTTGTAAACAAGATATCGGATGCTAGCTTCACAGGAAGAGCAGTAGCTGACGTTGATGTCAACAAATGTGAGCCATGGGAACTGCCCGGGAAGGCAAAGATGGGGGAAAAAGAATGGTACTTCTTCAGTCTTAGGGATAGGAAATACCCAACGGGAGTGAGAACAAACCGAGCCACAAACACTGGATACTGGAAGACCACTGGGAAAGATAAAGAGATCCTCAACAGTGTTACATCAGAAGTAGTTGGGATGAAGAAGACTTTGGTTTTCTACAAAGGCAGAGCTCCAAGAGGAGAGAAAACCAATTGGGTCATGCATGAATATCATGGTATTAATTGTTTCAAACAGGATGACTGGGTTGTTTGGCGTGTATTTCAAAAGAGTGCAGGTGTAAAGAAGTACCCTACAAACCAAACTAGGGCAATGAACCCGTACAACCTAGAAATAAGTCCAAGTTTTGTACCACCACAAACTATGCAGCTAGGAGATCCAGGACAGTTTCTATACGGAAGAAACTACATGAGCAATGCAGAGTTAGCTGAGATCAACAGGGTACTGAGAGATAGCACCGTATCCAACAATGTTAACCTACAAATGCAACCCCAGATGCCATACCAACCAACAGGAAATTGCTTCACAATTTCTGGCTTAAATTTGCACCTTGGTGGAGGTGGTGTAATCACACAGCCTTTACTGCGACCAATGGCACCATCACCTCATCCAAATCAAGCAATCGGTCAGCATGATGCTTGTCAAATCATGACGACAGCCAATTCTCTGGTAGCAGAAAATAATGCAGGATATGTTGCAGAAATGAGCAACACAAACCATCCCAACCATAGATCGTATATGGGAGTGGAACATTGCGCGGAGTTGGATAGCTACTGGCATCTTCCCTGCTAA 987 0.4428 MEEAQAKEETLPPGFRFHPTDEELITYYLVNKISDASFTGRAVADVDVNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSVTSEVVGMKKTLVFYKGRAPRGEKTNWVMHEYHGINCFKQDDWVVWRVFQKSAGVKKYPTNQTRAMNPYNLEISPSFVPPQTMQLGDPGQFLYGRNYMSNAELAEINRVLRDSTVSNNVNLQMQPQMPYQPTGNCFTISGLNLHLGGGGVITQPLLRPMAPSPHPNQAIGQHDACQIMTTANSLVAENNAGYVAEMSNTNHPNHRSYMGVEHCAELDSYWHLPC* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02156 328 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 221 - -
Pte2g02156 328 Gene3D NAC domain 20 159 IPR036093 GO:0003677|GO:0006355
Pte2g02156 328 Pfam No apical meristem (NAM) protein 12 137 IPR003441 GO:0003677|GO:0006355
Pte2g02156 328 SUPERFAMILY NAC domain 6 155 IPR036093 GO:0003677|GO:0006355
Pte2g02156 328 ProSiteProfiles NAC domain profile. 11 155 IPR003441 GO:0003677|GO:0006355
Pte2g02156 328 FunFam NAC domain-containing protein 100-like 20 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02156 Pte-Chr2 41524771 41526528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02156 2 324 NAC Transcription Factor Family AT2G24430 49.288 2.36e-96 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte2g02156 NAM 1.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02156 - - cill:122316890 456.062