Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02142 ATGCCAAGTCTCCCTTCTAATACAACGACAATACTGCTGTCTCAGCCCACCCCGAACCGAGCCTGCTATTTTCCATCTCTACCTTTCTCTGAACTTCACTCTCCTTCTCGGTTCATCAACATAAAAAAAAATAAAAAATATTGGATCTCTGCATATAGCTTCTCGAAAAAGCAAACTCTCCTGAGTCAATTCCATTGGGTTGGAGAAATCACAGGGTATCTGCTGCGTTTTCCTTTGGGAACCCTTTTTTTTGTGTGTGTGTTTATTTCGGCGTTTATATTCTATTTGGCTAAAGGGAAAACCCAATTTCGATTCAAGTTTGGAGGGAAGAAGCTTGGTGATTTTGGATTTATGGAGAGAATCATAGGAGGAAAGTTTAAGCTTGGTCGGAAGATTGGAAGTGGATCCTTCGGTGAAATTTATTTGGCTACCGATTTGGATTCCGGGGAGATTTTGGCCGTGAAGATGGAAAACAACAAGACAAAGCATCCGCAATTGCTCTACGAGGCGAAGCTGTATAATATTCTTCAAGGAGGAAGTGGTATTCCAAGTATAAAATGGTGTGGAACTGACGCGGAAAACAATGTTCTAGTAATGGATCTTCTCGGACCCAGTCTTGAGGACCTCTTTGTATACTGTGGAAGGAAATTTTCTCTGAAGACAGTCTTGATGCTTGCTGATCAGATGATCACAAGAGTCGAATACATGCATTCCAAGGGGTTTCTTCACAGAGACATTAAACCAGATAATTTTCTTATGGGTCTTGGTAAGAAAGCAAATCAGGTATACGTCATTGATTTTGGGCTTGCAAAAAGGTATAGAGATAGTGCTAGTAACAGGCATATTCCTTACAGGGAGAACAAAAATTTGACAGGCACTGCTAGATATGCAAGTTGCAATACTCATTTAGGTGTTGAACAAAGCCGTCGTGATGATTTGGAGTCTCTTGGTTATGTTTTTCTGTACTTTCTGAGAGGAAGCCTTCCTTGGCAGGGCCTCAAAGCTGCCACAAAAAAGCAAAAATATGACAAGATTTGTGAGAAGAAATTATCAACTCCGATTGAGATCCTATGCAAGTCCTATCCTGTGGAGTTTGCCTCTTACTTCCATTATTGCCTCTCCTTGAAGTTTGATCAGCGGCCTGATTATGGGTTTCTGAAGCGACTTTTCCGTGACTTGTTTATTCGGGAAGGATATGATGTTGATTATATATTTGACTGGACAATTCTGAAGTATCAGCAAACACAAAGGACAAAGACACTGGCTAACTCGAATTTGCAGCAAGTTTCTGGAGTAACTGGTGTTGAAACCATGCAAACAGATGTAAATAAGCTTAAAGGAGTCCATGACGCTTGTAATTCACCATGGATTGGAGAACCTAGAGGATCAACAAATCTTAGTCGTCCAGATAATCATCTGCAGTACAGATCATCGCATGCTCAAAATATGAAAAGCGAAAATTTGGTTGGGAAGAAGCATGTGAGTTAA 1488 0.4059 MPSLPSNTTTILLSQPTPNRACYFPSLPFSELHSPSRFINIKKNKKYWISAYSFSKKQTLLSQFHWVGEITGYLLRFPLGTLFFVCVFISAFIFYLAKGKTQFRFKFGGKKLGDFGFMERIIGGKFKLGRKIGSGSFGEIYLATDLDSGEILAVKMENNKTKHPQLLYEAKLYNILQGGSGIPSIKWCGTDAENNVLVMDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRVEYMHSKGFLHRDIKPDNFLMGLGKKANQVYVIDFGLAKRYRDSASNRHIPYRENKNLTGTARYASCNTHLGVEQSRRDDLESLGYVFLYFLRGSLPWQGLKAATKKQKYDKICEKKLSTPIEILCKSYPVEFASYFHYCLSLKFDQRPDYGFLKRLFRDLFIREGYDVDYIFDWTILKYQQTQRTKTLANSNLQQVSGVTGVETMQTDVNKLKGVHDACNSPWIGEPRGSTNLSRPDNHLQYRSSHAQNMKSENLVGKKHVS* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02142 495 Gene3D Transferase(Phosphotransferase) domain 1 109 449 - -
Pte2g02142 495 PANTHER CASEIN KINASE-RELATED 119 429 - -
Pte2g02142 495 ProSiteProfiles Protein kinase domain profile. 126 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02142 495 SUPERFAMILY Protein kinase-like (PK-like) 121 407 IPR011009 -
Pte2g02142 495 CDD STKc_CK1_delta_epsilon 125 399 - -
Pte2g02142 495 FunFam Casein kinase I isoform delta-like 118 456 - -
Pte2g02142 495 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Pte2g02142 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Pte2g02142 495 SMART serkin_6 126 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02142 495 Pfam Protein kinase domain 127 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02142 Pte-Chr2 41401284 41404909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02142 125 330 MAP Kinase Kinase Kinase AT3G06030 27.982 4.95e-15 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pte2g02142 Pkinase 2.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02142 K08960 - nnu:104595135 607.446