LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte2g02141	ATGGCAATGGCGACATCCTCGTCACTATCAGTAGTATCGGGCTGTAAATTTTCAAGAGCGAGAGGCTTTCACGGTACAACAACATCGCCATCTTCATCAAGGACGAATAGGCTCAACTGCATATGTAATTCTTCATATAATCATTCTCGAAGGCTCGCTCTCTTACACCTTGGAGCTGCTCTCCCGCAGACAGAGCTAATTAGTGCAAGAGCATCTCAGTTGTTAAGAGCGGAAGGACAAGCAATGGAAGTTTTGACTGCTGGAAAACAAAACCAAGCAGGTGCTACTGTCGGTGAACAAAGCGTACTGGATTGGGTTAAAAATGACAAGAGAAGAATGCTTCATGTCGTATACTCTGTTGGTGATTTAGAAAAGACTATAAAGTTCTACACTGAATGCTTAGGCATGAAGCTACTCAGAAAGCGTGATATACCTGAAGAAGGATATGCAAATGCGTTTCTTGGATATGGACCTGAAGAGTCTCACTTCGTTGTTGAACTTACTTATAATTATGGAGTGGACAAGTATGATATAGGAACCGGTTTTGGCCATTTTGGTATTGCAGTTGAAGATGTTAAAAAGTCAGTAGATCTCATAAAGGCAAAGGGAGGAAAAGTTATCCAAGAACCTGGATTTGTTAAAGGTTACAATGCAGTGGTTGCTGTTATTGAAGATCCTGACGGGTATACGTTTGAGCTTATAGAGAGGGGTCCTAATCCTGAACCTTTGTGTCAAGTGATGCTTAGAGTAGGTGATCTTGACCGCGCCATTACCTTTTATGAGAGGGCTTTTGGGATGCAACTTCTTCGCAAAAGTGACAATCCCGGGTACAAGTACACTACTGCAGTAATGGGTTATGGTCCTGAAGATAAAAATGCTGTGCTGGAGTTCACTTATAATTATGGGATCAGCGATTATGACAAGGGAAATGGTTATACCCAGATAGCCATTGGGACAGATGATGTTTATAAGAGTGCAGAAGCAATAAGACAGTATGGTGGGAAGATTACTCGTGAACCTGGGCCGTTGCCAGTTATCAACACCAAGATTACCGCATGCCTGGACCCTGATGGTTGGAAATCAGTATTTGTTGATAATGTGGATTTTCTGAAGGAACTAGAGTGA	1125	0.4222	MAMATSSSLSVVSGCKFSRARGFHGTTTSPSSSRTNRLNCICNSSYNHSRRLALLHLGAALPQTELISARASQLLRAEGQAMEVLTAGKQNQAGATVGEQSVLDWVKNDKRRMLHVVYSVGDLEKTIKFYTECLGMKLLRKRDIPEEGYANAFLGYGPEESHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVKKSVDLIKAKGGKVIQEPGFVKGYNAVVAVIEDPDGYTFELIERGPNPEPLCQVMLRVGDLDRAITFYERAFGMQLLRKSDNPGYKYTTAVMGYGPEDKNAVLEFTYNYGISDYDKGNGYTQIAIGTDDVYKSAEAIRQYGGKITREPGPLPVINTKITACLDPDGWKSVFVDNVDFLKELE*	375

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte2g02141	374	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	111	241	IPR029068	-
	Pte2g02141	374	NCBIfam	lactoylglutathione lyase	112	237	IPR004361	GO:0004462\|GO:0046872
	Pte2g02141	374	ProSitePatterns	Glyoxalase I signature 1.	115	136	IPR018146	GO:0004462\|GO:0046872
	Pte2g02141	374	Gene3D	-	239	374	IPR029068	-
	Pte2g02141	374	ProSitePatterns	Glyoxalase I signature 2.	179	191	IPR018146	GO:0004462\|GO:0046872
	Pte2g02141	374	FunFam	Lactoylglutathione lyase	239	374	-	-
	Pte2g02141	374	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	243	364	IPR029068	-
	Pte2g02141	374	Gene3D	-	85	237	IPR029068	-
	Pte2g02141	374	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	112	236	IPR037523	-
	Pte2g02141	374	CDD	GlxI_Ni	113	234	-	-
	Pte2g02141	374	PANTHER	LACTOYLGLUTATHIONE LYASE	94	374	-	-
	Pte2g02141	374	ProSitePatterns	Glyoxalase I signature 1.	245	266	IPR018146	GO:0004462\|GO:0046872
	Pte2g02141	374	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	242	366	IPR037523	-
	Pte2g02141	374	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	245	360	IPR004360	-
	Pte2g02141	374	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	113	233	IPR004360	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte2g02141	Pte-Chr2	41395671	41400778	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte2g02141	245	363	Calmodulin-binding Proteins	AT1G08110	27.586	7.16e-10	57.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte2g02141	K01759		-	cit:102613371	540.036