Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02136 ATGAGCTCTAAGAACCAAAACTCTGAAACAGAGAGCAGCTCCAATTCATTCCCATCACCGCCACCATCACCATCCTCACCTTCCTCTACTCAATCTCTCCTAAGATTTGTTTCACAGAAGGAACATAAGTACCCTCAAGCTAAAAATATCAAACGAATCAGAGAGTCAAACAAGCACCCAGCTTACCATGGTGTGAGAATGCGTAGTTGGGGTAAATGGGTGTCTGAAATTCGCGAGCCCAAAAAGAAATCACGTATATGGTTGGGTACATTCCCTAACCCTGAAATGGCAGCCAGAGCTCATGATGTTGCTTCTTTGAGCATCAAAGGTAACTCTGCCATTCTCAATTTTCCAGAACTTGTGAACTTGATACCTCGTCCGGTGTCACTATCTCCTAGAGATATTCAGGCAGCAGCAGCAAAAGCAGCACAAATGGATCACTTTAACTCACCGTCTTGTTCATCTTCTTCGCGATCTTCTTTGGCATCTGCAATGGAATTATCAACGGGGTCCGAGGAATTGAGCGAGATAGTGACTTTGCCAAGTTTAGATGATAGTTACGAGACGAAAGAGTTGGCAAATGAGTTTGTATTTATGGAGTCTGTGGATGAATGGATGTATACTCCACCATGGTTGCAGAGTGTGCAAGACTGTGATGGGTACATGGATGAATTTGCAGTGGCAGAGAGCAACACATCTAATAGCTATCACAGTTTCCTATGGAACTATTAG 732 0.4358 MSSKNQNSETESSSNSFPSPPPSPSSPSSTQSLLRFVSQKEHKYPQAKNIKRIRESNKHPAYHGVRMRSWGKWVSEIREPKKKSRIWLGTFPNPEMAARAHDVASLSIKGNSAILNFPELVNLIPRPVSLSPRDIQAAAAKAAQMDHFNSPSCSSSSRSSLASAMELSTGSEELSEIVTLPSLDDSYETKELANEFVFMESVDEWMYTPPWLQSVQDCDGYMDEFAVAESNTSNSYHSFLWNY* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02136 243 Gene3D AP2/ERF domain 61 120 IPR036955 GO:0003700|GO:0006355
Pte2g02136 243 ProSiteProfiles AP2/ERF domain profile. 61 118 IPR001471 GO:0003700|GO:0006355
Pte2g02136 243 CDD AP2 62 120 IPR001471 GO:0003700|GO:0006355
Pte2g02136 243 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Pte2g02136 243 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Pte2g02136 243 SMART rav1_2 61 124 IPR001471 GO:0003700|GO:0006355
Pte2g02136 243 MobiDBLite consensus disorder prediction 1 16 - -
Pte2g02136 243 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Pte2g02136 243 FunFam Ethylene-responsive transcription factor 2 60 119 - -
Pte2g02136 243 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 190 - -
Pte2g02136 243 SUPERFAMILY DNA-binding domain 61 119 IPR016177 GO:0003677
Pte2g02136 243 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02136 Pte-Chr2 41366417 41367906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02136 37 221 AP2-EREBP Transcription Factor Family AT5G11590 61.421 9.09e-70 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte2g02136 AP2 2.6e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02136 K09286 - qsa:O6P43_015497 281.567