Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02133 ATGGAACCAATCTATCTTACGAAAAGCAATAACCCCAAAATCCATGCTCACCCTCGCAAACTGTTTCATTTAATAACCAATGCATTGCACATCCGTAATGGTGACCTTCCCCGACCAACTTCTACAATGTCCGTTGCCTCTACTTCCTCCTCTTCCCACCACCAAAACCAAAAAGATAAACCCAGCAAGCCGTTGGCTGAGCGGATTGTCCGAGCCCTCCGCCATCCCCTACTCCTCCTACATCGCACAGACTCAATTTTCTTCATATTGGGTGCCACTGGAAATGTGTACACTGTGACCCTATCATCCACACCTACATGCACATGTCCTGATCACACAACTCCATGCAAGCACATCCTATTTGTCTACCTCAGAGTTCTGGGGTTGTCTCAGGACGATGTACGCATCCAAAGGAAGACTCTTAGGCCATGTCAGCTTAGTGCTCTGCTCAAAATGCCCTCCTTGCCTGATGCTGTTGCAGGAACGACCCTTCGTGAAAGGTTTCACCAGCAATACTTTCAGAGGAAGCAGGGTAGTTTTGCAAAAATCGTTAAGATAGAGGAGGATGGAACAACCTGTCCGGTTTGTCTCGAAGAGATTAAGAAAGCAAAGATGGCCGCGGCTTGTGGGACATGTCGGAACCCTATCCATGAAGAATGCTTGGTGAGGTGGAAGAGAAGTAGAGGGAGCGGGCCAGTTTGTTGTGTAATATGCAGAGCACCATGGAGGGATAGGACAGAGCAGCAAGATAACTATCTGAATCTTTCAGCTTACGTTAGTCAGGATGATTTTGCAGATGCCAATGACGGTAGCAACGTCCGCAGTACTTAA 831 0.4765 MEPIYLTKSNNPKIHAHPRKLFHLITNALHIRNGDLPRPTSTMSVASTSSSSHHQNQKDKPSKPLAERIVRALRHPLLLLHRTDSIFFILGATGNVYTVTLSSTPTCTCPDHTTPCKHILFVYLRVLGLSQDDVRIQRKTLRPCQLSALLKMPSLPDAVAGTTLRERFHQQYFQRKQGSFAKIVKIEEDGTTCPVCLEEIKKAKMAAACGTCRNPIHEECLVRWKRSRGSGPVCCVICRAPWRDRTEQQDNYLNLSAYVSQDDFADANDGSNVRST* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02133 276 SUPERFAMILY RING/U-box 186 251 - -
Pte2g02133 276 ProSiteProfiles Zinc finger SWIM-type profile. 97 127 IPR007527 GO:0008270
Pte2g02133 276 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 55 251 IPR039903 GO:0061630
Pte2g02133 276 Pfam SWIM zinc finger 97 125 IPR007527 GO:0008270
Pte2g02133 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 172 270 IPR013083 -
Pte2g02133 276 MobiDBLite consensus disorder prediction 36 64 - -
Pte2g02133 276 MobiDBLite consensus disorder prediction 37 55 - -
Pte2g02133 276 ProSiteProfiles Zinc finger RING-type profile. 193 239 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02133 Pte-Chr2 41360775 41361708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02133 187 275 C3H Transcription Factor Family AT3G58720 31.461 1.98e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02133 - - qsa:O6P43_015491 297.745