Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02114 ATGGAACTCAATGGAAATGATTTCTTAGATGAATTACTTGCTCTGAGAACTGAAACCGGGGAAACCATTGATCTCATTGAGAGTAATATTAATGGTCAGTCATTTCCAAGCAGTTTGAGTTTTGATAGCTTTGGTCGTTACAATAATTATAACCCGCTTGCCACTCTTCCAAATTCTTCCTATCAAAGTGTCTACGAAAATTTCAATAGCTGCTGTACGTTTAATGCTTTCTCCAGTCCTCTTCTTGATGAATTCTCAAGAACCCAGATCACTCATCAATATTCATCCTACGACACTGTTGATACTTCACTTGCGAATTCACCTCCTTTCATGGCTCAAGAAGCACACGCACACCCTTTGATGCCTCACGAAGAATACTCGTTGTCTCTAATTGAAGAAGACGATCCGAGTTTTCTAGGGATGGATCTCGGCAACGTGGAATCACAAATGAATTGTAAAATGGACTCAATGCAATCCCCAGAAATGTCGACCCAAGTTTTCAACTTCGGTACTTGTTTAGAAACAAAGAGTCAGCCGACACAGAAATTGCAGGGTCAGCCTTCTAAGAATTTGATGGCGGAGAGAAGAAGAAGAAAGAGACTCAATGATCGCCTTTCCATGCTGAGAGCAATAGTCCCAAAGATAAGCAAGATGGATAGAACATCTATCGTAGGAGACACGATAGACTACATGAAAGAATTACTGGAAAAGATCAACAAACTGCAACAAGAAGGTGATCGAGAAACTGATGTGAAGTCAAGCATGAAGGACATTTTCAATTTCAAAGCTCCAAAATCGAGTGAAATGTTAGTGAGAAACTCACCCAAGTTTGATGTGGAGAAGAGGGACGATGATGACACCAGAATTGATGTCTGCTGTGCTGGCAAGCCAGGGTTATTGCAGACAATGGTGAATACTCTGGAAGCTTTAGGCCTTGAAGTTGAACAGTGTGTTATTAGCTGTTTCCATGATTTTGCAATGCAGGCTTCTTGCTCCAACCTGGAATTAGATGATAGAACTGCAACAAGTTCTGAAGATATAAAGCAAGCATTATTCAGAAATGCTGGTTATGGTGGAAGATGTTGA 1086 0.4061 MELNGNDFLDELLALRTETGETIDLIESNINGQSFPSSLSFDSFGRYNNYNPLATLPNSSYQSVYENFNSCCTFNAFSSPLLDEFSRTQITHQYSSYDTVDTSLANSPPFMAQEAHAHPLMPHEEYSLSLIEEDDPSFLGMDLGNVESQMNCKMDSMQSPEMSTQVFNFGTCLETKSQPTQKLQGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSIVGDTIDYMKELLEKINKLQQEGDRETDVKSSMKDIFNFKAPKSSEMLVRNSPKFDVEKRDDDDTRIDVCCAGKPGLLQTMVNTLEALGLEVEQCVISCFHDFAMQASCSNLELDDRTATSSEDIKQALFRNAGYGGRC* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02114 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 185 234 IPR011598 GO:0046983
Pte2g02114 361 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 93 356 - -
Pte2g02114 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 189 246 IPR036638 GO:0046983
Pte2g02114 361 Gene3D - 177 249 IPR036638 GO:0046983
Pte2g02114 361 SMART finulus 191 240 IPR011598 GO:0046983
Pte2g02114 361 Pfam Helix-loop-helix DNA-binding domain 191 234 IPR011598 GO:0046983
Pte2g02114 361 Coils Coil 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02114 Pte-Chr2 41170929 41173174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02114 176 361 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 61.290 7.79e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte2g02114 HLH 8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02114 - - qsa:O6P43_019531 383.259