Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02087 ATGTTCTCTAAACTTCCACAACATCGTCAGCAACAGCAACTACAGCAACCTCAGCCTCAATCTCAGCTGCACCCCTTCGCCCATCACCCATTCCAACTCTCACGTGAATGTCAAACCTCAGAGGAAGACGACAGTCGAAGTAGCGGTGGGCAAACAACCCTCGTCACCCCCAATCAGAAGATCATGACTTCTGAACCAGGTGCAACTGGCGATGGCTCTTCCATCGAAGTGGTTCGGCGACCGAGGGGTCGCCCACCTGGATCCAAGAACAAGCCCAGACCACCCGTAATCATAACACGTGAACCTGAGCCCGGTATGAGTCCTTACATACTAGAAGTTCCTGGCGGGTGCGACGTGGTTGAAGCCATTGCACGCTTCTGTCGCCGCAAGAACTTGGGTCTCTGCATCCTAACCGGTTCGGGAACTGTAGCAAACGTCACGCTGCGCCAGCCTTCTACGACACCAGGAGCTACCGTCACCTTTCACGGTCGATTTGATATCTTGTCTGTGTCAGCCACGTTCATCCCTCAACAAACGCCGTCGTTTCCTACAGTACCGAACGGTTTCACCATCTCACTTGCTGGGCCTCAGGGTCAGATAGTTGGGGGGTTGGTAGCGGGTGCGTTAATTGCAGCTGGAACAGTGTTTGTGATTGCCGCTTCATTTAATAACCCCTTGTATCACAGGTTGCCTTTGGACGATGAGATTAGGGCTCCGGTTTCAGGAGGCGGAGGAGAAGGTTCTCCGCCTGGTTCAGGTGGCAGCGGTGACTGTGGGCATGGTCAAGCAGAATCTGGTGGCATGTCTATTTACAGTTGTCATTTGCCTTCAAGCGACGTGATTTGGGCTCCCACAGCCAGAGCTCCGCCACCTTACTGA 879 0.537 MFSKLPQHRQQQQLQQPQPQSQLHPFAHHPFQLSRECQTSEEDDSRSSGGQTTLVTPNQKIMTSEPGATGDGSSIEVVRRPRGRPPGSKNKPRPPVIITREPEPGMSPYILEVPGGCDVVEAIARFCRRKNLGLCILTGSGTVANVTLRQPSTTPGATVTFHGRFDILSVSATFIPQQTPSFPTVPNGFTISLAGPQGQIVGGLVAGALIAAGTVFVIAASFNNPLYHRLPLDDEIRAPVSGGGGEGSPPGSGGSGDCGHGQAESGGMSIYSCHLPSSDVIWAPTARAPPPY* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02087 292 Gene3D - 107 240 - -
Pte2g02087 292 MobiDBLite consensus disorder prediction 1 27 - -
Pte2g02087 292 FunFam AT-hook motif nuclear-localized protein 107 241 - -
Pte2g02087 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 41 283 IPR014476 GO:0003680
Pte2g02087 292 SUPERFAMILY AF0104/ALDC/Ptd012-like 105 235 - -
Pte2g02087 292 MobiDBLite consensus disorder prediction 44 70 - -
Pte2g02087 292 MobiDBLite consensus disorder prediction 238 261 - -
Pte2g02087 292 MobiDBLite consensus disorder prediction 1 103 - -
Pte2g02087 292 Pfam Plants and Prokaryotes Conserved (PCC) domain 108 224 IPR005175 -
Pte2g02087 292 CDD DUF296 108 222 IPR005175 -
Pte2g02087 292 ProSiteProfiles PPC domain profile profile. 102 244 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02087 Pte-Chr2 40913078 40915182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02087 69 293 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 68.103 7.97e-102 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02087 - - qsa:O6P43_015380 372.474