Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02076 ATGTTTGTTGGTTCTCCTTATCAGATAGCCCCGCTCTCCCTGAATCAAAAGCTCAATGGCATTCCTACTCTACGGGTAATCGAACCAATTTCTCACCAATTGCCACACCCATCAATTTTATCATCGAAATTCTATACTAGATTGAGATGTTACAGCACAACGATTACTGCAACTGAGAAGGAAGAGCCGTTCACAGTGTCTTACCTTATTAACAATTTTGGGTTCTCACCACAAAAAGCTCAGGCAGCTGCCAAGAAGGTCCGTTTCGAGGATTCCCAAAGACCCGACGAGGTTGTCATATTTTTCAGAAATTATGGGTTTTCAGATTTTCAAGTTCGAGAAATCATTCAAGACGATCCCAGTTTGCTTGTATCCGAACATGAAAAGGTCATCCTTCCCAAGTTGGAATATTTACTCTCCCAAGGTTTTTCCAAGTCAGTCCTTTGCGAAATGGTGACTGCCTCCCCTATAATATTGAGAAGAAGCTTGGAGAACCATATTATTCCTTTGGTTCATTTGATCAAAAGCTTGCATCCAGATACCAAGAAAGCTCTTGAAGCCATCAGATGCTCTATGTGGATCCTTATCTCCGTGACTCGTGCAGAGAGCAATATATCGTTTTTGCGTCAGAGCGGAATGCCTGATTCAAAGATTGCTATTTTGCTTCAGCACCATTCGTCGAGCAGAGTACTGAACCTGACTCCAAATGAATTTCAAAATGCAGTGGCAGAAGTGAAAGAGATGGGGTTTGATATTTCTAAATCAACTTTTGCGGTAGCATTGGGTGCGTTGAAGACGATAAACAAGTCCAAATGGCAAAGCAAGTTTGAAATCTACAAGAAATGGGGTTGGTCTGATCAAGATTTTCGAGAGGCTTTTCGGAGAAGACCATGGTGCATGTACGTTTCTGAGCAGAAAATTGAGGAAGTAATGAATTTGTTTGTCAATCAGATGGGCTGCCATCCTGAGATGCTTGCTAAGCATCCAATTCTTTTTTCAATGAGTTTGGAGAAAAGGATCATTCCTAGAGCTTGTGTTCTAAAACATCTTCTATCGAATGGTTTGATAGGTGATAATTACTATACTGCATTTGAGATCTCTGAGAAGCGTTTTCTGCTGAAGTTTGTAGAGCATTTTGCAGTAGATGCACCTAGGCTATTGGAGATATACCAAGAAAAAAAATTTGTTTCGAGTTAA 1197 0.406 MFVGSPYQIAPLSLNQKLNGIPTLRVIEPISHQLPHPSILSSKFYTRLRCYSTTITATEKEEPFTVSYLINNFGFSPQKAQAAAKKVRFEDSQRPDEVVIFFRNYGFSDFQVREIIQDDPSLLVSEHEKVILPKLEYLLSQGFSKSVLCEMVTASPIILRRSLENHIIPLVHLIKSLHPDTKKALEAIRCSMWILISVTRAESNISFLRQSGMPDSKIAILLQHHSSSRVLNLTPNEFQNAVAEVKEMGFDISKSTFAVALGALKTINKSKWQSKFEIYKKWGWSDQDFREAFRRRPWCMYVSEQKIEEVMNLFVNQMGCHPEMLAKHPILFSMSLEKRIIPRACVLKHLLSNGLIGDNYYTAFEISEKRFLLKFVEHFAVDAPRLLEIYQEKKFVSS* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02076 398 PANTHER CGI-12 PROTEIN-RELATED 61 378 IPR003690 GO:0003690|GO:0006355
Pte2g02076 398 Pfam mTERF 101 251 IPR003690 GO:0003690|GO:0006355
Pte2g02076 398 Pfam mTERF 268 371 IPR003690 GO:0003690|GO:0006355
Pte2g02076 398 Gene3D Transcription termination factor 3, mitochondrial 187 381 IPR038538 -
Pte2g02076 398 SMART mt_12 113 144 IPR003690 GO:0003690|GO:0006355
Pte2g02076 398 SMART mt_12 322 356 IPR003690 GO:0003690|GO:0006355
Pte2g02076 398 SMART mt_12 290 321 IPR003690 GO:0003690|GO:0006355
Pte2g02076 398 SMART mt_12 149 180 IPR003690 GO:0003690|GO:0006355
Pte2g02076 398 SMART mt_12 255 285 IPR003690 GO:0003690|GO:0006355
Pte2g02076 398 FunFam Mitochondrial transcription termination factor-like 163 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02076 Pte-Chr2 40839558 40841506 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte2g02076 mTERF 4.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02076 K15031 - vvi:100256384 281.567